G107581


Basic Information

Item Value
gene id G107581
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4305709 ~ 4305999 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122101
gcatggcacaacacaagaagatactggaggaaacaggtacaaaagtatctatatccacagtaaaacgagtcctatatcaatataacctgaaaggccgctcagcaaggaagaagccactgctccaaaaccaccatgaaaaagccaggctacggtttgcaactgcacatggggacaaagatcgtactttttggagagatgccctctggtcagatgaaacaaaaatagaactgtttggccataatgaccatcattatgtttggaggaaaacggcggatgcttgtaagccgaaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122101 True 291 lncRNA 0.44 1 4305709 4305999

Neighbor

gene id symbol gene type direction distance location
deptor deptor coding upstream 3173 4236880 ~ 4302536 (+)
LOC110507036 LOC106594376 coding upstream 185967 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 220029 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 240102 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 883610 3350582 ~ 3487129 (+)
col14a1a col14a1 coding downstream 21984 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 296959 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 328504 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 429658 4735246 ~ 4737284 (+)
LOC110506140 LOC106606110 coding downstream 842102 5148101 ~ 5176987 (+)
G107580 NA non-coding upstream 136 4305312 ~ 4305573 (+)
G106869 NA non-coding upstream 50773 4254102 ~ 4254936 (+)
G106868 NA non-coding upstream 52532 4252917 ~ 4253177 (+)
G106864 NA non-coding upstream 58467 4246739 ~ 4247242 (+)
G107582 NA non-coding downstream 189 4306188 ~ 4306575 (+)
G107611 NA non-coding downstream 42868 4348867 ~ 4349162 (+)
G107612 NA non-coding downstream 47242 4353241 ~ 4353525 (+)
G107613 NA non-coding downstream 47585 4353584 ~ 4353832 (+)
G107614 NA non-coding downstream 49030 4355029 ~ 4355288 (+)
G106814 NA other upstream 167213 4137813 ~ 4138496 (+)
G106775 NA other upstream 278115 4027075 ~ 4027594 (+)
G106575 NA other upstream 505357 3639434 ~ 3800352 (+)
G106595 NA other upstream 627859 3676265 ~ 3677850 (+)
G107922 NA other downstream 438169 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 502740 4808739 ~ 4811575 (+)
G108048 NA other downstream 551912 4857911 ~ 4858274 (+)
G108280 NA other downstream 830357 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 990180 5296179 ~ 5299933 (+)

Expression


Co-expression Network