G107625


Basic Information

Item Value
gene id G107625
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4378858 ~ 4379314 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122177
ggtattggagtggccatcacaaagccctgacctcaatcctattgaaaatgtgtgggcagaactgaaaaagcttgtgcgagcaaggaggccagctctgtcaggaggaatgggccaaaattcacccaatttattgtgggaagcttgtggaaggctacccgaaatatttgacccaaattaaacaatttcaaggcaatgctaccgaatactaattgagtgtatgtaaacttctgacccactgggaatgtaatgaaagaaataaaagctgaaataaatcgttctctctactattattctgacatttcacattcttaaaataaagtggtgatcctaactgacctaaaacaggggatttttactgggattaaatgtcaggaattatgaaaaactgagtttaaatgtatttggctatgtaaacctccgacttcaactgaatatGTCTAAATCTCTTCCTCTGCCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122177 True 457 lncRNA 0.41 1 4378858 4379314

Neighbor

gene id symbol gene type direction distance location
deptor deptor coding upstream 76322 4236880 ~ 4302536 (+)
LOC110507036 LOC106594376 coding upstream 259116 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 293178 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 313251 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 956759 3350582 ~ 3487129 (+)
LOC110520696 mtbp coding downstream 223644 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 255189 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 356343 4735246 ~ 4737284 (+)
LOC110506140 LOC106606110 coding downstream 768787 5148101 ~ 5176987 (+)
tbc1d31 tbc1d31 coding downstream 816617 5195931 ~ 5227041 (+)
G107618 NA non-coding upstream 14150 4364471 ~ 4364708 (+)
G107614 NA non-coding upstream 23570 4355029 ~ 4355288 (+)
G107613 NA non-coding upstream 25026 4353584 ~ 4353832 (+)
G107612 NA non-coding upstream 25333 4353241 ~ 4353525 (+)
G107611 NA non-coding upstream 29696 4348867 ~ 4349162 (+)
G107627 NA non-coding downstream 3284 4382598 ~ 4383867 (+)
G107632 NA non-coding downstream 8213 4387527 ~ 4388933 (+)
G107645 NA non-coding downstream 35061 4414375 ~ 4416057 (+)
G107664 NA non-coding downstream 85646 4464960 ~ 4466164 (+)
G107680 NA non-coding downstream 147253 4526567 ~ 4527074 (+)
G106814 NA other upstream 240362 4137813 ~ 4138496 (+)
G106775 NA other upstream 351264 4027075 ~ 4027594 (+)
G106575 NA other upstream 578506 3639434 ~ 3800352 (+)
G106595 NA other upstream 701008 3676265 ~ 3677850 (+)
G107922 NA other downstream 364854 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 429425 4808739 ~ 4811575 (+)
G108048 NA other downstream 478597 4857911 ~ 4858274 (+)
G108280 NA other downstream 757042 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 916865 5296179 ~ 5299933 (+)

Expression


Co-expression Network