G107922


Basic Information

Item Value
gene id G107922
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4744168 ~ 4745586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122634
GTCATCACCATGTCATTAGCTAATTAATTAACAACAGACGAACACATTTATAGTGAGGTctaaacatagaagtattttctTCTGCGGTTCTATTTAATGATCAGAGTCTATTCCTGGTAATAGCGTGAAGGATATCTGTGATGATCGTCCTCTTATCTCTGTCCCCTAAACTACAGTTAGGCCTGATTATGAATAAGCAGACAATGTTTATGGAACTGTTTATGAGGCACATGTATTTATTGAATATAATGTGGGACTAGCGATGTATTTCGATGTCTTGATTGTGGATCACCTGCAAACGAGAGGAGACGTAtgagagtgtcacgttctgacctttatttcctttgttttgtcattatgtaggatggtcagggcgtgagttggggtgggcagtctatgtttgtttttctatgattgggggatttctatgtttcggcctagtatggttctcaatcagaggcagtcatgggcaggcagagtggtcatgtgggtgggtacagggtcagggtcaggacagggtcaggcagagtggtcatgtgggtgggtacagggtcagggtcaggcagagtggtcatgtgggtgggtacagggtcaggcagagtggtcatgtgggtgggtacagggtcaggcagagtggtcatgtgggtgggtacagggaaagggtcaggcagagtggtcatgtGGGTGGGTCCAGGGTCAGgacagggtcacacagagtggtCATGtgggtgggtacagggtcagggtcaggcagagtggtcatgtGGGttggtacagggtcaggcagagtggtcatgtgggtgggtacagggtcaggacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122634 True 821 TUCP 0.49 3 4744168 4745586

Neighbor

gene id symbol gene type direction distance location
LOC118937361 NA coding upstream 6884 4735246 ~ 4737284 (+)
LOC110520696 mtbp coding upstream 89435 4602958 ~ 4654733 (+)
LOC118937359 NA coding upstream 108030 4634503 ~ 4636138 (+)
col14a1a col14a1 coding upstream 171787 4327983 ~ 4572381 (+)
deptor deptor coding upstream 441632 4236880 ~ 4302536 (+)
LOC110506140 LOC106606110 coding downstream 402515 5148101 ~ 5176987 (+)
tbc1d31 tbc1d31 coding downstream 450345 5195931 ~ 5227041 (+)
LOC110520809 LOC106598492 coding downstream 482471 5228057 ~ 5235894 (+)
mrpl32 LOC106595598 coding downstream 528570 5274156 ~ 5275584 (+)
LOC118937366 NA coding downstream 538108 5283628 ~ 5285741 (+)
G107917 NA non-coding upstream 10320 4731957 ~ 4733848 (+)
G107912 NA non-coding upstream 21878 4711544 ~ 4722290 (+)
G107911 NA non-coding upstream 33229 4710089 ~ 4710939 (+)
G107898 NA non-coding upstream 36694 4706199 ~ 4707474 (+)
G107932 NA non-coding downstream 17705 4763291 ~ 4764472 (+)
G107942 NA non-coding downstream 39045 4784631 ~ 4785544 (+)
G107958 NA non-coding downstream 74147 4819733 ~ 4820296 (+)
G107965 NA non-coding downstream 91797 4837383 ~ 4837938 (+)
G107967 NA non-coding downstream 93818 4839404 ~ 4840100 (+)
G106814 NA other upstream 605672 4137813 ~ 4138496 (+)
G106775 NA other upstream 716574 4027075 ~ 4027594 (+)
G106575 NA other upstream 943816 3639434 ~ 3800352 (+)
G106595 NA other upstream 1066318 3676265 ~ 3677850 (+)
mboat1 LOC106573215 other upstream 1257039 3350582 ~ 3487129 (+)
G107955 LOC106592862 other downstream 63153 4808739 ~ 4811575 (+)
G108048 NA other downstream 112325 4857911 ~ 4858274 (+)
G108280 NA other downstream 390770 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 550593 5296179 ~ 5299933 (+)
ptp4a3b LOC106596188 other downstream 760960 5480975 ~ 5542867 (+)

Expression


Co-expression Network