G108070


Basic Information

Item Value
gene id G108070
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4887868 ~ 4888093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122816
attggaaaacctccctggtctttgtggttgaatctgtatttgaaattcactgttcaactgagggacctcacagttaaggtctgtgtatgtgtggggaacagagatgatgtagtcattcaaaaatcatgttaaaccaGTAGCTCTCAGCCAGtagagactgctgaggggaggacttcATCACAGCCTAACTACCAGTAGCTCTCAGCCAGtagagactgctgagggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122816 True 226 lncRNA 0.46 1 4887868 4888093

Neighbor

gene id symbol gene type direction distance location
LOC118937361 NA coding upstream 150584 4735246 ~ 4737284 (+)
LOC110520696 mtbp coding upstream 233135 4602958 ~ 4654733 (+)
LOC118937359 NA coding upstream 251730 4634503 ~ 4636138 (+)
col14a1a col14a1 coding upstream 315487 4327983 ~ 4572381 (+)
deptor deptor coding upstream 585332 4236880 ~ 4302536 (+)
LOC110506140 LOC106606110 coding downstream 260008 5148101 ~ 5176987 (+)
tbc1d31 tbc1d31 coding downstream 307838 5195931 ~ 5227041 (+)
LOC110520809 LOC106598492 coding downstream 339964 5228057 ~ 5235894 (+)
mrpl32 LOC106595598 coding downstream 386063 5274156 ~ 5275584 (+)
LOC118937366 NA coding downstream 395601 5283628 ~ 5285741 (+)
G108042 NA non-coding upstream 37907 4849747 ~ 4849961 (+)
G108031 NA non-coding upstream 45519 4842072 ~ 4842349 (+)
G107967 NA non-coding upstream 47768 4839404 ~ 4840100 (+)
G107965 NA non-coding upstream 49930 4837383 ~ 4837938 (+)
G107958 NA non-coding upstream 67572 4819733 ~ 4820296 (+)
G108071 NA non-coding downstream 3 4888096 ~ 4888300 (+)
G108084 NA non-coding downstream 24961 4913054 ~ 4913353 (+)
G108136 NA non-coding downstream 63666 4951759 ~ 4952386 (+)
G108139 NA non-coding downstream 67355 4955448 ~ 4955782 (+)
G108149 NA non-coding downstream 75777 4963870 ~ 4964105 (+)
G108048 NA other upstream 29594 4857911 ~ 4858274 (+)
G107955 LOC106592862 other upstream 76293 4808739 ~ 4811575 (+)
G107922 NA other upstream 142282 4744168 ~ 4745586 (+)
G106814 NA other upstream 749372 4137813 ~ 4138496 (+)
G106775 NA other upstream 860274 4027075 ~ 4027594 (+)
G108280 NA other downstream 248263 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 408086 5296179 ~ 5299933 (+)
ptp4a3b LOC106596188 other downstream 618453 5480975 ~ 5542867 (+)
LOC110506279 LOC106595015 other downstream 693200 5575366 ~ 5592253 (+)
G108682 NA other downstream 831872 5719965 ~ 5725579 (+)

Expression


Co-expression Network