Gene
RNA
| Item | Value |
|---|---|
| gene id | G108331 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5223607 ~ 5224256 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123115 | False | 200 | lncRNA | 0.48 | 3 | 5223607 | 5224256 |
| TU123116 | False | 417 | lncRNA | 0.38 | 2 | 5223607 | 5224085 |
| TU123117 | True | 442 | lncRNA | 0.37 | 3 | 5223607 | 5224256 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506140 | LOC106606110 | coding | upstream | 46620 | 5148101 ~ 5176987 (+) |
| LOC118937361 | NA | coding | upstream | 486323 | 4735246 ~ 4737284 (+) |
| LOC110520696 | mtbp | coding | upstream | 568874 | 4602958 ~ 4654733 (+) |
| LOC118937359 | NA | coding | upstream | 587469 | 4634503 ~ 4636138 (+) |
| col14a1a | col14a1 | coding | upstream | 651226 | 4327983 ~ 4572381 (+) |
| LOC110520809 | LOC106598492 | coding | downstream | 3801 | 5228057 ~ 5235894 (+) |
| mrpl32 | LOC106595598 | coding | downstream | 49900 | 5274156 ~ 5275584 (+) |
| LOC118937366 | NA | coding | downstream | 59438 | 5283628 ~ 5285741 (+) |
| ccdc127a | cc127 | coding | downstream | 82020 | 5306276 ~ 5310035 (+) |
| phf20l1 | LOC100196869 | coding | downstream | 97298 | 5321554 ~ 5349672 (+) |
| G108330 | NA | non-coding | upstream | 910 | 5221868 ~ 5222697 (+) |
| G108326 | NA | non-coding | upstream | 13247 | 5209780 ~ 5210360 (+) |
| G108323 | NA | non-coding | upstream | 16541 | 5206565 ~ 5207066 (+) |
| G108252 | NA | non-coding | upstream | 30650 | 5191577 ~ 5192957 (+) |
| G108300 | NA | non-coding | upstream | 51952 | 5167395 ~ 5171655 (+) |
| G108332 | NA | non-coding | downstream | 950 | 5225206 ~ 5226130 (+) |
| G108334 | NA | non-coding | downstream | 13971 | 5238227 ~ 5240350 (+) |
| G108336 | NA | non-coding | downstream | 16355 | 5240611 ~ 5241683 (+) |
| G108333 | LOC100380869 | non-coding | downstream | 25457 | 5249713 ~ 5254032 (+) |
| G108280 | NA | other | upstream | 86615 | 5136356 ~ 5136992 (+) |
| G108048 | NA | other | upstream | 365333 | 4857911 ~ 4858274 (+) |
| G107955 | LOC106592862 | other | upstream | 412032 | 4808739 ~ 4811575 (+) |
| G107922 | NA | other | upstream | 478021 | 4744168 ~ 4745586 (+) |
| G106814 | NA | other | upstream | 1085111 | 4137813 ~ 4138496 (+) |
| G108354 | LOC106573122 | other | downstream | 71923 | 5296179 ~ 5299933 (+) |
| ptp4a3b | LOC106596188 | other | downstream | 282290 | 5480975 ~ 5542867 (+) |
| LOC110506279 | LOC106595015 | other | downstream | 357037 | 5575366 ~ 5592253 (+) |
| G108682 | NA | other | downstream | 495709 | 5719965 ~ 5725579 (+) |
| G108702 | NA | other | downstream | 555958 | 5780214 ~ 5782921 (+) |
