Gene
RNA
| Item | Value |
|---|---|
| gene id | G108529 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5365831 ~ 5366530 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123363 | True | 478 | lncRNA | 0.41 | 2 | 5365831 | 5366530 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| phf20l1 | LOC100196869 | coding | upstream | 16159 | 5321554 ~ 5349672 (+) |
| ccdc127a | cc127 | coding | upstream | 55796 | 5306276 ~ 5310035 (+) |
| LOC118937366 | NA | coding | upstream | 80090 | 5283628 ~ 5285741 (+) |
| mrpl32 | LOC106595598 | coding | upstream | 90247 | 5274156 ~ 5275584 (+) |
| LOC110520809 | LOC106598492 | coding | upstream | 129937 | 5228057 ~ 5235894 (+) |
| ccn4b | wisp1 | coding | downstream | 84969 | 5451499 ~ 5457130 (+) |
| ptp4a3b | LOC106596188 | coding | downstream | 114445 | 5480975 ~ 5542867 (+) |
| dync1i1 | LOC105016552 | coding | downstream | 176464 | 5542994 ~ 5572618 (+) |
| LOC110506279 | LOC106595015 | coding | downstream | 208836 | 5575366 ~ 5592253 (+) |
| jarid2a | LOC106573577 | coding | downstream | 249466 | 5615996 ~ 5753847 (+) |
| G108361 | NA | non-coding | upstream | 31346 | 5333753 ~ 5334485 (+) |
| G108333 | LOC100380869 | non-coding | upstream | 111799 | 5249713 ~ 5254032 (+) |
| G108336 | NA | non-coding | upstream | 124148 | 5240611 ~ 5241683 (+) |
| G108334 | NA | non-coding | upstream | 125481 | 5238227 ~ 5240350 (+) |
| tg | LOC106573164 | non-coding | downstream | 8978 | 5348252 ~ 5447200 (+) |
| G108547 | NA | non-coding | downstream | 13548 | 5380078 ~ 5380438 (+) |
| G108549 | NA | non-coding | downstream | 24892 | 5391422 ~ 5391666 (+) |
| G108551 | NA | non-coding | downstream | 31807 | 5398337 ~ 5398594 (+) |
| G108554 | NA | non-coding | downstream | 35026 | 5401556 ~ 5401846 (+) |
| G108354 | LOC106573122 | other | upstream | 65898 | 5296179 ~ 5299933 (+) |
| G108280 | NA | other | upstream | 228839 | 5136356 ~ 5136992 (+) |
| G108048 | NA | other | upstream | 507557 | 4857911 ~ 4858274 (+) |
| G107955 | LOC106592862 | other | upstream | 554256 | 4808739 ~ 4811575 (+) |
| G107922 | NA | other | upstream | 620245 | 4744168 ~ 4745586 (+) |
| G108682 | NA | other | downstream | 353435 | 5719965 ~ 5725579 (+) |
| G108702 | NA | other | downstream | 413684 | 5780214 ~ 5782921 (+) |
| G108733 | NA | other | downstream | 533981 | 5900511 ~ 5900950 (+) |
