G108653


Basic Information

Item Value
gene id G108653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5644628 ~ 5646025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123534
CAGGACCAAGAAGTGTGAGGAGGACAGGACCAGGAAGTGTGAGGAGGACAGGACCAGGAAGTGCAGTGTGAGGAGGATGTTCAAAGAGGTGTAGAATGAACTTAATAAAAAGGTTGTCTTGGTTTATTCATCACCGTCGTTGTAGCTGCACTTAGATGACGAACAgattgacacgcacacacacgcacgcacacacgcagagagagagaacagcacaAGACAGACGTCTTTAAAACAGCTATTCTTTGTGGTCAGGCGCCATGCTCATTACCGGCTGACTAAATTGCTGACAGGAAGTCAGAGGTCAACAGTCCCCTTTGACCCCAGGGCTGGCAGGGGTGAGGGGGATTGAGTCCAgcagaccagacaagaccagCCTGAAGGAAGCAGAAGGGAGAGAAGCGTGACAGGACCAGGAAGTGTAGTGTGAGTAGGACAggacaaaatggcaccctTTTATAAGGACTAGTGTTCTATCTGGGAGGCAGACGGAGACTCtcatggttgtgttgtattgtatagtcaaatcaaatttaaacacatgttatttgtcacgtgcaccgaatacaacaggtgtagactttacagtgaaatgcttacgtacaagccattaaccaacaatgcagctttaagaaaaataagtgttaagatattatttaataaaataaactgaagtaaaaaaaatacataaatgaaacatttaaatttaaaagaagaaaatagaaaaataacaaataattaaagtgcgacaataaaataacagtagcgaggcgatATACAGGCCCAGATTATATACAGGCCCAGATTATATACAGGCCCAGATTATATACAGGCCCAGATTATATACAGGCCCAGATTATATACAGGCCCTGATTATATACAGGCCCAGATTATATACAGGCCTAGATTATATACAGGCCCAGATTATATACAGGCCCAAGCCCAGATTATATACAGGCCCAGATTATATACAGGCCCAGATTATATACAGGCCTAGATTATATACAGGCCCAAATTATATACAGGCCCAGATTATATACAGGCCCAGATTATATCGAAGCCCAGATTATATCGGGGCCCATATATTATCGAGGCCCAGATTAAATCAAACCATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123534 True 1115 lncRNA 0.42 3 5644628 5646025

Neighbor

gene id symbol gene type direction distance location
LOC110506279 LOC106595015 coding upstream 52375 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 72010 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 101761 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 187498 5451499 ~ 5457130 (+)
tg LOC106573164 coding upstream 197428 5348252 ~ 5447200 (+)
mylipb LOC106596795 coding downstream 166222 5812247 ~ 5839646 (+)
LOC110505528 gmpr coding downstream 195492 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 307956 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 330175 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 332241 5978266 ~ 5979890 (+)
G108652 NA non-coding upstream 2397 5639671 ~ 5642231 (+)
G108623 NA non-coding upstream 29923 5614221 ~ 5614705 (+)
G108622 NA non-coding upstream 30505 5613585 ~ 5614123 (+)
G108621 NA non-coding upstream 31591 5612416 ~ 5613037 (+)
G108584 NA non-coding upstream 38312 5604983 ~ 5606316 (+)
G108663 NA non-coding downstream 15017 5661042 ~ 5663859 (+)
G108675 NA non-coding downstream 61692 5707717 ~ 5709050 (+)
G108676 NA non-coding downstream 63332 5709357 ~ 5710446 (+)
G108677 NA non-coding downstream 65124 5711149 ~ 5711910 (+)
G108685 NA non-coding downstream 87590 5733615 ~ 5775376 (+)
G108354 LOC106573122 other upstream 344695 5296179 ~ 5299933 (+)
G108280 NA other upstream 507636 5136356 ~ 5136992 (+)
G108048 NA other upstream 786354 4857911 ~ 4858274 (+)
G108682 NA other downstream 73940 5719965 ~ 5725579 (+)
G108702 NA other downstream 134189 5780214 ~ 5782921 (+)
G108733 NA other downstream 254486 5900511 ~ 5900950 (+)

Expression


Co-expression Network