G108694


Basic Information

Item Value
gene id G108694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5767946 ~ 5769067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123593
cagatttgtaccttgtcagctcggggatttgaacttgcaaccttccggttactagcccaacgctctaaccactaggctaccctgccgccccaaatcacCCATAGCGACACGGCAAGTCGCCCGGTAACAGTGGAACACACTGTTCACAGTCCAGTGAGCACCAGAGCAGATACCCCAGACCGTCTATGTCTGCGTGGGGGCATTCTAATTAGATTCTAATGTGGCATATCAGCTCTACATGTTATGTAAGGACGTTGCTGCACATTCCTCACCAGTGATGTATATTAAGGGACTATTTCATAGTCAAGTAACTGGTGATCACTGCATTCATAGAGGAGTTATTGACTGGTAGAGTTGCTCCCGTGACCTACGTCACTAACACTTAGATCCCTTCCTTTCAATCTGACCTTTTCTGTTTCCTGACGATAGACAAACTGTTGGGGCAAAAAGGAGCAGAGTGTAACTGCATGGGTTCATCATATgactgagtcacacacacacacaacccaggcTGCACTAAGTAAAGTCCTACTGAAAGAATACCGTGGCAGTGGCACAGATCACCAACATCAAAGCATCACCAAATAGACATTCCACTTTAAACATGAGGAGAATAActaatacagagagacagacagacagagggagggagggagacatgaagacataaagacagggacatggagagggagacagacaaagagagggagagagacagacatgaagacataaagacagggacatggagagagagacagacaaagagagggagagagacagacatgaagacataaagacagggacatggagagagagacagacatgaagacataaagacagggacatggagagagatacagacatgaagacagggacatggagagagagacagacatgaagacagggacatagagagagacagacaaagagagggagacagacatgaagacataaagacagggacatagagagagacagacaaagagagggagacagacatgaAGACAAagacagggacatggagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123593 True 1028 lncRNA 0.47 2 5767946 5769067

Neighbor

gene id symbol gene type direction distance location
jarid2a LOC106573577 coding upstream 14099 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 175693 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 195328 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 225079 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 310816 5451499 ~ 5457130 (+)
mylipb LOC106596795 coding downstream 43180 5812247 ~ 5839646 (+)
LOC110505528 gmpr coding downstream 72450 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 184914 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 207133 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 209199 5978266 ~ 5979890 (+)
G108644 NA non-coding upstream 7026 5758602 ~ 5760920 (+)
G108643 NA non-coding upstream 9993 5757004 ~ 5757953 (+)
G108677 NA non-coding upstream 56036 5711149 ~ 5711910 (+)
G108676 NA non-coding upstream 57500 5709357 ~ 5710446 (+)
G108675 NA non-coding upstream 58896 5707717 ~ 5709050 (+)
G108697 NA non-coding downstream 5313 5774380 ~ 5774708 (+)
G108698 NA non-coding downstream 6840 5775907 ~ 5779231 (+)
G108699 NA non-coding downstream 7803 5776870 ~ 5778747 (+)
G108702 NA non-coding downstream 11147 5780214 ~ 5782921 (+)
G108707 NA non-coding downstream 35019 5804086 ~ 5805042 (+)
G108682 NA other upstream 42367 5719965 ~ 5725579 (+)
G108354 LOC106573122 other upstream 468013 5296179 ~ 5299933 (+)
G108280 NA other upstream 630954 5136356 ~ 5136992 (+)
G108733 NA other downstream 131444 5900511 ~ 5900950 (+)
G108775 LOC106606109 other downstream 287929 6056996 ~ 6058335 (+)

Expression


Co-expression Network