G108702


Basic Information

Item Value
gene id G108702
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5780214 ~ 5782921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123615
AAACTCTGAGTGAAAGAAACGACAGATACGGCTACTGCCACGTTCATTTCCCAAGCCTCAAGACATCATGAAGATATCCTGGAGACCATGTGAAACGGAAAGTATCATTAAAAAACTAAATCCTAAAATCCCAAAATCCTAGTATAGAATTTACAATATAGGCTGCAGCTATGATTTTGTAGGCAGCATGTTTGCAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACCGACAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATACTGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATACTGTTCTGtttagaggacatcatactgacTGTACAGAATACTGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATACTGTTCTGTTTAGAGGACATCTTACTGactgtactgttctgtttagAGGACATCTTACTGactgtactgttctgtttagAGGACATCTTACTGACAATAATGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATAATGTTCTGTTTAGAGGACATCTTACTGACTGTACATGAGAATAATGTTCTGTTTAGAGGACATCTTACTGACT
>TU123616
AAACTCTGAGTGAAAGAAACGACAGATACGGCTACTGCCACGTTCATTTCCCAAGCCTCAAGACATCATGAAGATATCCTGGAGACCATGTGAAACGGAAAGTATCATTAAAAAACTAAATCCTAAAATCCCAAAATCCTAGTATAGAATTTACAATATAGGCTGCAGCTATGATTTTGTAGGCAGCATGTTTGCAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACCGACAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATACTGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATACTGTTCTGtttagaggacatcatactgacTGTACAGAATACTGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATACTGTTCTGTTTAGAGGACATCTTACTGactgtactgttctgtttagAGGACATCTTACTGactgtactgttctgtttagAGGACATCTTACTGACAATAATGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACCGACAATACTGTTCTGTTTAGAGGACATCTTACTGactgtactgttctgtttagAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATACTGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATACTGTTCTGTTTAGAGGACATCTTACTGACTGTACAGAATAATGTTCTGTTTAGAGGACATCTTACTGACTGTACA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107379574

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123615 False 752 lncRNA 0.39 4 5780214 5782921
TU123616 True 959 TUCP 0.38 3 5780214 5782644

Neighbor

gene id symbol gene type direction distance location
jarid2a LOC106573577 coding upstream 26367 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 187961 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 207596 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 237347 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 323084 5451499 ~ 5457130 (+)
mylipb LOC106596795 coding downstream 29326 5812247 ~ 5839646 (+)
LOC110505528 gmpr coding downstream 58596 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 171060 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 193279 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 195345 5978266 ~ 5979890 (+)
G108698 NA non-coding upstream 983 5775907 ~ 5779231 (+)
G108699 NA non-coding upstream 1467 5776870 ~ 5778747 (+)
G108685 NA non-coding upstream 4838 5733615 ~ 5775376 (+)
G108697 NA non-coding upstream 5506 5774380 ~ 5774708 (+)
G108694 NA non-coding upstream 11147 5767946 ~ 5769067 (+)
G108707 NA non-coding downstream 21165 5804086 ~ 5805042 (+)
G108709 NA non-coding downstream 23500 5806421 ~ 5806940 (+)
G108712 NA non-coding downstream 50735 5833656 ~ 5834519 (+)
G108646 NA non-coding downstream 72334 5855255 ~ 5855783 (+)
G108682 NA other upstream 54635 5719965 ~ 5725579 (+)
G108354 LOC106573122 other upstream 480281 5296179 ~ 5299933 (+)
G108280 NA other upstream 643222 5136356 ~ 5136992 (+)
G108733 NA other downstream 117590 5900511 ~ 5900950 (+)
G108775 LOC106606109 other downstream 274075 6056996 ~ 6058335 (+)
G108805 LOC106594197 other downstream 414011 6151712 ~ 6199341 (+)

Expression


Co-expression Network