Gene
RNA
| Item | Value |
|---|---|
| gene id | G108707 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5804086 ~ 5805042 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123621 | False | 452 | lncRNA | 0.49 | 3 | 5804086 | 5805042 |
| TU123622 | True | 310 | lncRNA | 0.58 | 3 | 5804086 | 5804551 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| jarid2a | LOC106573577 | coding | upstream | 50239 | 5615996 ~ 5753847 (+) |
| LOC110506279 | LOC106595015 | coding | upstream | 211833 | 5575366 ~ 5592253 (+) |
| dync1i1 | LOC105016552 | coding | upstream | 231468 | 5542994 ~ 5572618 (+) |
| ptp4a3b | LOC106596188 | coding | upstream | 261219 | 5480975 ~ 5542867 (+) |
| ccn4b | wisp1 | coding | upstream | 346956 | 5451499 ~ 5457130 (+) |
| mylipb | LOC106596795 | coding | downstream | 7205 | 5812247 ~ 5839646 (+) |
| LOC110505528 | gmpr | coding | downstream | 36475 | 5841517 ~ 5854355 (+) |
| LOC110505637 | LOC106573538 | coding | downstream | 148939 | 5953886 ~ 5958813 (+) |
| LOC110505679 | LOC106579367 | coding | downstream | 171158 | 5976200 ~ 6002265 (+) |
| LOC118937375 | NA | coding | downstream | 173224 | 5978266 ~ 5979890 (+) |
| G108702 | NA | non-coding | upstream | 21165 | 5780214 ~ 5782921 (+) |
| G108698 | NA | non-coding | upstream | 24855 | 5775907 ~ 5779231 (+) |
| G108699 | NA | non-coding | upstream | 25339 | 5776870 ~ 5778747 (+) |
| G108697 | NA | non-coding | upstream | 29378 | 5774380 ~ 5774708 (+) |
| G108694 | NA | non-coding | upstream | 35019 | 5767946 ~ 5769067 (+) |
| G108709 | NA | non-coding | downstream | 1379 | 5806421 ~ 5806940 (+) |
| G108712 | NA | non-coding | downstream | 28614 | 5833656 ~ 5834519 (+) |
| G108646 | NA | non-coding | downstream | 50213 | 5855255 ~ 5855783 (+) |
| G108722 | NA | non-coding | downstream | 74895 | 5879937 ~ 5880466 (+) |
| G108682 | NA | other | upstream | 78507 | 5719965 ~ 5725579 (+) |
| G108354 | LOC106573122 | other | upstream | 504153 | 5296179 ~ 5299933 (+) |
| G108733 | NA | other | downstream | 95469 | 5900511 ~ 5900950 (+) |
| G108775 | LOC106606109 | other | downstream | 251954 | 6056996 ~ 6058335 (+) |
| G108805 | LOC106594197 | other | downstream | 391890 | 6151712 ~ 6199341 (+) |
