G108709


Basic Information

Item Value
gene id G108709
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5806421 ~ 5806940 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123624
ggcatagccaaagacacaacaaccccctggacaggacactagtctatctcctatttctgtagtgaggcagcttgaggtaccagtacaccccctggacaggacactagtctatctgtCACAAATGAGCAGCTACAAGTGCAGCTTGTAGACTCAGTAAGGTTTTTTCCTGTGACTATGTGATAATTATAGCCATCAGCAGATTATATGTGGAGCTTGTAGACTCAGTAAGGTTTTTTCCTGTGACTATGTGATAATTATAGCCATCAGCAGATTTTATGTGGAGCTTGTTcatacagtgcatttagaaagtattcagacccaatgagtttctccacattttgtttacgatacaaccttattctaaaatggatttgttttttattccctcgtcaatctacacacaatatcccataatgacaaagcaaaaacagatataGATGGTTGTGCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123624 True 449 lncRNA 0.40 2 5806421 5806940

Neighbor

gene id symbol gene type direction distance location
jarid2a LOC106573577 coding upstream 52574 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 214168 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 233803 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 263554 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 349291 5451499 ~ 5457130 (+)
mylipb LOC106596795 coding downstream 5307 5812247 ~ 5839646 (+)
LOC110505528 gmpr coding downstream 34577 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 147041 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 169260 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 171326 5978266 ~ 5979890 (+)
G108707 NA non-coding upstream 1379 5804086 ~ 5805042 (+)
G108702 NA non-coding upstream 23500 5780214 ~ 5782921 (+)
G108698 NA non-coding upstream 27190 5775907 ~ 5779231 (+)
G108699 NA non-coding upstream 27674 5776870 ~ 5778747 (+)
G108697 NA non-coding upstream 31713 5774380 ~ 5774708 (+)
G108712 NA non-coding downstream 26716 5833656 ~ 5834519 (+)
G108646 NA non-coding downstream 48315 5855255 ~ 5855783 (+)
G108722 NA non-coding downstream 72997 5879937 ~ 5880466 (+)
G108630 NA non-coding downstream 74203 5881143 ~ 5882036 (+)
G108682 NA other upstream 80842 5719965 ~ 5725579 (+)
G108354 LOC106573122 other upstream 506488 5296179 ~ 5299933 (+)
G108733 NA other downstream 93571 5900511 ~ 5900950 (+)
G108775 LOC106606109 other downstream 250056 6056996 ~ 6058335 (+)
G108805 LOC106594197 other downstream 389992 6151712 ~ 6199341 (+)

Expression


Co-expression Network