G108712


Basic Information

Item Value
gene id G108712
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5833656 ~ 5834519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123629
AGGTCAGCAACCATGTAGCATGGCTTATACACCAACAACATGCCTTCTACAGGTCAGCAACCATGTAGCATGGCTTACACACCAACAACATGCCTTCTACAGGTCAGCAACCATGTAGCATGGCTTACACACCAACATAATGCCTTCTACAGGTCAGCAACCATGTAGCATGTAGCATGGCTCACATACCAACAACATGCCTTCTACAGGTCAGCAACCATGTAGCATGTAGCATGGCTCACACACCAACAACATGCCTTCTAC

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase MYLIP-A-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123629 True 264 lncRNA 0.47 2 5833656 5834519

Neighbor

gene id symbol gene type direction distance location
jarid2a LOC106573577 coding upstream 79809 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 241403 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 261038 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 290789 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 376526 5451499 ~ 5457130 (+)
LOC110505528 gmpr coding downstream 6998 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 119462 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 141681 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 143747 5978266 ~ 5979890 (+)
setd2 LOC106593284 coding downstream 168473 6002992 ~ 6049501 (+)
G108709 NA non-coding upstream 26716 5806421 ~ 5806940 (+)
G108707 NA non-coding upstream 28614 5804086 ~ 5805042 (+)
G108702 NA non-coding upstream 50735 5780214 ~ 5782921 (+)
G108698 NA non-coding upstream 54425 5775907 ~ 5779231 (+)
G108699 NA non-coding upstream 54909 5776870 ~ 5778747 (+)
G108646 NA non-coding downstream 20736 5855255 ~ 5855783 (+)
G108722 NA non-coding downstream 45418 5879937 ~ 5880466 (+)
G108630 NA non-coding downstream 46624 5881143 ~ 5882036 (+)
G108647 NA non-coding downstream 48575 5883094 ~ 5885133 (+)
G108682 NA other upstream 108077 5719965 ~ 5725579 (+)
G108354 LOC106573122 other upstream 533723 5296179 ~ 5299933 (+)
G108733 NA other downstream 65992 5900511 ~ 5900950 (+)
G108775 LOC106606109 other downstream 222477 6056996 ~ 6058335 (+)
G108805 LOC106594197 other downstream 362413 6151712 ~ 6199341 (+)

Expression


Co-expression Network