G108646


Basic Information

Item Value
gene id G108646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5855255 ~ 5855783 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123522
ACAATGTATTCTTAGGTGACATATTGCAAGTTGAGGTTTGAGTTTTACATGGGATGTCATTCATACAAAGAACTGATGAAAGTGAATCAGAGACATTTTAGAGGGTCATTGGCTGTAATGATTTAACATGGAAAAACACAAACCTATAATTCAGGTATTGCACATACAACACAATTACAACTAAAGTTAATTGGACAGGTTCACTATACCTGTAGTTCAATGTCAGTGGTTCCCCACTCCACCACCTTTTACAGGGTAAAACGTTGTATAACGTCCAGAAGAACCACTGTAAAACGTTGTATAACGTCCAGAAGAACCACTGTAAAACGTTGTATAACGTCCAGAAGAACCACTGTAAAACGTTGTATAACGTCCAGAAGAACCACTGTAAAACGTTGTATAACGTCCAGAAGAACCACTGTAAAACGTTGTATAACGTCCAGAAGAACCACTGTAAAACGTTGTATAACGTCCAGAAGAACCACTGTAAAACGTTGTATAACGTCCAGAAGAACCAATGTAAAACGTT

Function

NR:

description
PREDICTED: uncharacterized protein LOC109137384

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123522 True 529 lncRNA 0.38 1 5855255 5855783

Neighbor

gene id symbol gene type direction distance location
LOC110505528 gmpr coding upstream 1081 5841517 ~ 5854355 (+)
mylipb LOC106596795 coding upstream 15609 5812247 ~ 5839646 (+)
jarid2a LOC106573577 coding upstream 101408 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 263002 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 282637 5542994 ~ 5572618 (+)
LOC110505637 LOC106573538 coding downstream 98198 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 120417 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 122483 5978266 ~ 5979890 (+)
setd2 LOC106593284 coding downstream 147209 6002992 ~ 6049501 (+)
LOC118937376 NA coding downstream 236296 6092079 ~ 6093940 (+)
G108712 NA non-coding upstream 20736 5833656 ~ 5834519 (+)
G108709 NA non-coding upstream 48315 5806421 ~ 5806940 (+)
G108707 NA non-coding upstream 50213 5804086 ~ 5805042 (+)
G108702 NA non-coding upstream 72334 5780214 ~ 5782921 (+)
G108722 NA non-coding downstream 24154 5879937 ~ 5880466 (+)
G108630 NA non-coding downstream 25360 5881143 ~ 5882036 (+)
G108647 NA non-coding downstream 27311 5883094 ~ 5885133 (+)
G108723 NA non-coding downstream 30477 5886260 ~ 5886472 (+)
G108728 NA non-coding downstream 40025 5895808 ~ 5896059 (+)
G108682 NA other upstream 129676 5719965 ~ 5725579 (+)
ptp4a3b LOC106596188 other upstream 312390 5480975 ~ 5542867 (+)
G108354 LOC106573122 other upstream 555322 5296179 ~ 5299933 (+)
G108733 NA other downstream 44728 5900511 ~ 5900950 (+)
G108775 LOC106606109 other downstream 201213 6056996 ~ 6058335 (+)
G108805 LOC106594197 other downstream 341149 6151712 ~ 6199341 (+)

Expression


Co-expression Network