Gene
RNA
| Item | Value |
|---|---|
| gene id | G108733 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5900511 ~ 5900950 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123653 | True | 440 | TUCP | 0.46 | 1 | 5900511 | 5900950 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505528 | gmpr | coding | upstream | 46337 | 5841517 ~ 5854355 (+) |
| mylipb | LOC106596795 | coding | upstream | 60865 | 5812247 ~ 5839646 (+) |
| jarid2a | LOC106573577 | coding | upstream | 146664 | 5615996 ~ 5753847 (+) |
| LOC110506279 | LOC106595015 | coding | upstream | 308258 | 5575366 ~ 5592253 (+) |
| dync1i1 | LOC105016552 | coding | upstream | 327893 | 5542994 ~ 5572618 (+) |
| LOC110505637 | LOC106573538 | coding | downstream | 53031 | 5953886 ~ 5958813 (+) |
| LOC110505679 | LOC106579367 | coding | downstream | 75250 | 5976200 ~ 6002265 (+) |
| LOC118937375 | NA | coding | downstream | 77316 | 5978266 ~ 5979890 (+) |
| setd2 | LOC106593284 | coding | downstream | 102042 | 6002992 ~ 6049501 (+) |
| LOC118937376 | NA | coding | downstream | 191129 | 6092079 ~ 6093940 (+) |
| G108731 | NA | non-coding | upstream | 493 | 5899724 ~ 5900018 (+) |
| G108730 | NA | non-coding | upstream | 1720 | 5898375 ~ 5898791 (+) |
| G108728 | NA | non-coding | upstream | 4452 | 5895808 ~ 5896059 (+) |
| G108723 | NA | non-coding | upstream | 14039 | 5886260 ~ 5886472 (+) |
| G108647 | NA | non-coding | upstream | 15378 | 5883094 ~ 5885133 (+) |
| G108736 | NA | non-coding | downstream | 10738 | 5911688 ~ 5911936 (+) |
| G108752 | NA | non-coding | downstream | 40055 | 5941005 ~ 5941256 (+) |
| G108753 | NA | non-coding | downstream | 42802 | 5943752 ~ 5944991 (+) |
| G108648 | NA | non-coding | downstream | 46561 | 5947511 ~ 5948341 (+) |
| G108627 | NA | non-coding | downstream | 54753 | 5955703 ~ 5962125 (+) |
| G108702 | NA | other | upstream | 117867 | 5780214 ~ 5782921 (+) |
| G108682 | NA | other | upstream | 174932 | 5719965 ~ 5725579 (+) |
| ptp4a3b | LOC106596188 | other | upstream | 357646 | 5480975 ~ 5542867 (+) |
| G108354 | LOC106573122 | other | upstream | 600578 | 5296179 ~ 5299933 (+) |
| G108775 | LOC106606109 | other | downstream | 156046 | 6056996 ~ 6058335 (+) |
| G108805 | LOC106594197 | other | downstream | 295982 | 6151712 ~ 6199341 (+) |
| G108874 | LOC106573552 | other | downstream | 381121 | 6282071 ~ 6285940 (+) |
