G108753


Basic Information

Item Value
gene id G108753
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5943752 ~ 5944991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123683
ACAGGTGAAGGATTACTCCTCTATACACAGAGCAGGGACCGGTGGATTACTCCTCTATACACAGAGCAGGGACCGGTGGATTACTCCTCTATACACAGAGCAGGGACCGGTGGATTACTCCTCTATACACAGAGCAGGGACCGGTGGATTACTCCTCTATACACAGAGCAGGGACAGGTGGATTATTCCTCTATACACAGAGCAGGGACAGGTGGTTTACTCCTCTATACACAGAGCAGGGACCGGTGGATTACTCCTCTATACACAGAGCAGGGACAGGTGGATTACTCCTCTATACACAGAGCAGGGACCGGTGGATTACTCCTCTATACACAGAGCAGGGACAGGTGGATTACTCCTCTATACACAGAGCAGGGACAGGTGGATTACTCCTCTATACACAGAGCAGGGACCGGTGGATTActcctctatacacagagtagGGACAGGTGGATTACTCCTCTATACACAGAGCAGGGACAGGTGGATTACTCCTCTATACACAGAGCAGGGACAGGTGGATTACTCCTCTATACACAGAGCAGGGACCGGTGGGTTACTCCTCTATACACAGAGCAGGGACAGGTGGATTACTCCTCTATACACAGAGCAGGGACCGGTGGGTTACTCCTCTATACACAGAGCAGGGACCGGTGGATTACTCCTCTATACACAGAGCAGGGACCGGTGGGTTACTCCTCTATACACAGAGCAGGGACAGGTGAAGGTTATAGGTGAAGAGGAGAATAACATTCCCAGAAGTGAATGGGAAAAGGACAAACCCTCAGTCCACACAGATCAGGAAGTGGTTGCTGTGACAAGTGAAAGGCTGTATAAACTTGCCCGAGGTCTCAGAAAGGAAAAATAACTTTCTCAACTGTCAAATCTTCGGGATGTCTTAGCTCTGTGAATATACAAGGACCTGCACACGTGATTCTTACTGAGTCAACATAATACATCAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106561390 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123683 True 962 lncRNA 0.49 3 5943752 5944991

Neighbor

gene id symbol gene type direction distance location
LOC110505528 gmpr coding upstream 89578 5841517 ~ 5854355 (+)
mylipb LOC106596795 coding upstream 104106 5812247 ~ 5839646 (+)
jarid2a LOC106573577 coding upstream 189905 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 351499 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 371134 5542994 ~ 5572618 (+)
LOC110505637 LOC106573538 coding downstream 8990 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 31209 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 33275 5978266 ~ 5979890 (+)
setd2 LOC106593284 coding downstream 58001 6002992 ~ 6049501 (+)
LOC118937376 NA coding downstream 147088 6092079 ~ 6093940 (+)
G108752 NA non-coding upstream 2496 5941005 ~ 5941256 (+)
G108736 NA non-coding upstream 31816 5911688 ~ 5911936 (+)
G108731 NA non-coding upstream 43734 5899724 ~ 5900018 (+)
G108730 NA non-coding upstream 44961 5898375 ~ 5898791 (+)
G108728 NA non-coding upstream 47693 5895808 ~ 5896059 (+)
G108648 NA non-coding downstream 2520 5947511 ~ 5948341 (+)
G108627 NA non-coding downstream 10712 5955703 ~ 5962125 (+)
G108756 NA non-coding downstream 38285 5983276 ~ 5983771 (+)
G108758 NA non-coding downstream 48542 5993533 ~ 5993799 (+)
G108760 NA non-coding downstream 50811 5995802 ~ 5996126 (+)
G108733 NA other upstream 42802 5900511 ~ 5900950 (+)
G108702 NA other upstream 161108 5780214 ~ 5782921 (+)
G108682 NA other upstream 218173 5719965 ~ 5725579 (+)
ptp4a3b LOC106596188 other upstream 400887 5480975 ~ 5542867 (+)
G108775 LOC106606109 other downstream 112005 6056996 ~ 6058335 (+)
G108805 LOC106594197 other downstream 251941 6151712 ~ 6199341 (+)
G108874 LOC106573552 other downstream 337080 6282071 ~ 6285940 (+)

Expression


Co-expression Network