G108758


Basic Information

Item Value
gene id G108758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5993533 ~ 5993799 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123693
ttttgatttgttttatcacttttttggttacatgattccatatgtgttacttcatagttttgacgtcttcactattattctacaatgtagaaaatagtaaaaaataaagaaaaacccttgaatgagtaggtgcgtcTAAACGTTTACCCTATCTGCTCCTGCACCATGCCAATGGCCTGGGAGGATGGGACACCACtactcaacacaccctgtaactcttctgaagttAAATCTCATGTACCCAAATACCCCTCTGcaagctgccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123693 True 267 lncRNA 0.31 1 5993533 5993799

Neighbor

gene id symbol gene type direction distance location
LOC118937375 NA coding upstream 13643 5978266 ~ 5979890 (+)
LOC110505637 LOC106573538 coding upstream 38088 5953886 ~ 5958813 (+)
LOC110505528 gmpr coding upstream 139359 5841517 ~ 5854355 (+)
mylipb LOC106596795 coding upstream 153887 5812247 ~ 5839646 (+)
jarid2a LOC106573577 coding upstream 239686 5615996 ~ 5753847 (+)
setd2 LOC106593284 coding downstream 9193 6002992 ~ 6049501 (+)
LOC118937376 NA coding downstream 98280 6092079 ~ 6093940 (+)
ccdc12 ccd12 coding downstream 237570 6231369 ~ 6250042 (+)
cep72 LOC106573558 coding downstream 292759 6286558 ~ 6312599 (+)
trip13 LOC106590995 coding downstream 384574 6378373 ~ 6389788 (+)
G108756 NA non-coding upstream 9762 5983276 ~ 5983771 (+)
G108627 NA non-coding upstream 31408 5955703 ~ 5962125 (+)
G108648 NA non-coding upstream 45192 5947511 ~ 5948341 (+)
G108753 NA non-coding upstream 48542 5943752 ~ 5944991 (+)
G108752 NA non-coding upstream 52277 5941005 ~ 5941256 (+)
G108760 NA non-coding downstream 2003 5995802 ~ 5996126 (+)
G108789 NA non-coding downstream 89337 6083136 ~ 6085913 (+)
G108773 NA non-coding downstream 93377 6087176 ~ 6087617 (+)
G108779 LOC106573589 non-coding downstream 124038 6117837 ~ 6119044 (+)
G108733 NA other upstream 92583 5900511 ~ 5900950 (+)
G108702 NA other upstream 210889 5780214 ~ 5782921 (+)
G108682 NA other upstream 267954 5719965 ~ 5725579 (+)
LOC110506279 LOC106595015 other upstream 411083 5575366 ~ 5592253 (+)
LOC110505679 LOC106579367 other downstream 5386 5976200 ~ 6002265 (+)
G108775 LOC106606109 other downstream 63197 6056996 ~ 6058335 (+)
G108805 LOC106594197 other downstream 203133 6151712 ~ 6199341 (+)
G108874 LOC106573552 other downstream 288272 6282071 ~ 6285940 (+)
G109020 NA other downstream 639279 6633078 ~ 6633913 (+)

Expression


Co-expression Network