G108773


Basic Information

Item Value
gene id G108773
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6087176 ~ 6087617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123710
TCTCCAACCTAACCGCAGAAAAAAGGGGGTTTTTCACAGGAAGTACATTCCTCTACTGACTCGTTGGGAGCCCAAGTCTATCTTTCCACCCATGTGTTCTACAGACACCACGACTGCCTctcaaatcgcaccctattccctatatggtgccaGTGCTTTGGACCGGAGCCCTGagcaaaaagtagtgcactataataggggaaagagtgtcatttgggacacaagccatCTCTAATTCAAAAGGGTTCAACTCAGTGCTTTCAGAAAATAACAAGATCCTAGCAGTATAAAAGGTTAAATCGCCCTGATGGATGAGGACCCtttcacagctgtctgtctaacagtTTACCAACAATATGACCGTTAGTTACAAAGGATGCAGATTTGGTTGCCGAGGACACGCAGGTCCTTACGAAGACCGGAGCTGCTGTGAAACACAGGC

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase MARCH7

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU123710 True 442 lncRNA 0.58 1 6087176 6087617

Neighbor

gene id symbol gene type direction distance location
setd2 LOC106593284 coding upstream 37675 6002992 ~ 6049501 (+)
LOC110505679 LOC106579367 coding upstream 84911 5976200 ~ 6002265 (+)
LOC118937375 NA coding upstream 107286 5978266 ~ 5979890 (+)
LOC110505637 LOC106573538 coding upstream 131731 5953886 ~ 5958813 (+)
LOC110505528 gmpr coding upstream 233002 5841517 ~ 5854355 (+)
LOC118937376 NA coding downstream 4462 6092079 ~ 6093940 (+)
ccdc12 ccd12 coding downstream 143752 6231369 ~ 6250042 (+)
cep72 LOC106573558 coding downstream 198941 6286558 ~ 6312599 (+)
trip13 LOC106590995 coding downstream 290756 6378373 ~ 6389788 (+)
nkd2b LOC106574162 coding downstream 315059 6402676 ~ 6499698 (+)
G108789 NA non-coding upstream 1263 6083136 ~ 6085913 (+)
G108760 NA non-coding upstream 91050 5995802 ~ 5996126 (+)
G108758 NA non-coding upstream 93377 5993533 ~ 5993799 (+)
G108756 NA non-coding upstream 103405 5983276 ~ 5983771 (+)
G108627 NA non-coding upstream 125051 5955703 ~ 5962125 (+)
G108779 LOC106573589 non-coding downstream 30220 6117837 ~ 6119044 (+)
G108799 NA non-coding downstream 45759 6133376 ~ 6134440 (+)
G108802 NA non-coding downstream 49158 6136775 ~ 6137832 (+)
G108805 LOC106594197 non-coding downstream 64095 6151712 ~ 6199341 (+)
G108775 LOC106606109 other upstream 28841 6056996 ~ 6058335 (+)
G108733 NA other upstream 186226 5900511 ~ 5900950 (+)
G108702 NA other upstream 304532 5780214 ~ 5782921 (+)
G108874 LOC106573552 other downstream 194454 6282071 ~ 6285940 (+)
G109020 NA other downstream 545461 6633078 ~ 6633913 (+)
rbm24b LOC106596654 other downstream 768469 6855864 ~ 6868976 (+)
malsu1 malsu1 other downstream 820930 6908511 ~ 6911256 (+)

Expression


Co-expression Network