Gene
RNA
| Item | Value |
|---|---|
| gene id | G110928 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 8360900 ~ 8361310 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: mediator of RNA polymerase II transcription subunit 15 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU126477 | True | 411 | lncRNA | 0.47 | 1 | 8360900 | 8361310 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516569 | LOC106595628 | coding | downstream | 236741 | 8088064 ~ 8124159 (-) |
| LOC118937629 | LOC106595628 | coding | downstream | 412383 | 7907425 ~ 8092825 (-) |
| LOC118937628 | LOC106595845 | coding | downstream | 422651 | 7933313 ~ 7938249 (-) |
| LOC118937627 | NA | coding | downstream | 448642 | 7909757 ~ 7912258 (-) |
| LOC110519743 | LOC106595845 | coding | downstream | 453647 | 7896171 ~ 8080181 (-) |
| LOC100136714 | twst2 | coding | upstream | 32475 | 8393785 ~ 8395476 (-) |
| LOC118937639 | LOC106573719 | coding | upstream | 62978 | 8423811 ~ 8429320 (-) |
| LOC118936301 | LOC106595809 | coding | upstream | 104797 | 8466107 ~ 8471522 (-) |
| LOC110506629 | LOC106573674 | coding | upstream | 146269 | 8507579 ~ 8513361 (-) |
| LOC110535184 | LOC106605879 | coding | upstream | 331826 | 8693136 ~ 8752164 (-) |
| G110910 | NA | non-coding | downstream | 12855 | 8347539 ~ 8348045 (-) |
| G110873 | LOC106595161 | non-coding | downstream | 32053 | 8326499 ~ 8328847 (-) |
| G110884 | NA | non-coding | downstream | 63236 | 8292843 ~ 8297664 (-) |
| G110843 | NA | non-coding | downstream | 167557 | 8191796 ~ 8193343 (-) |
| G110840 | NA | non-coding | downstream | 175877 | 8165648 ~ 8185023 (-) |
| G110935 | NA | non-coding | upstream | 15334 | 8376644 ~ 8377035 (-) |
| G110962 | NA | non-coding | upstream | 35452 | 8396762 ~ 8397110 (-) |
| G111017 | NA | non-coding | upstream | 59620 | 8420930 ~ 8421684 (-) |
| G111047 | LOC106574003 | non-coding | upstream | 138794 | 8500104 ~ 8505604 (-) |
| G111055 | NA | non-coding | upstream | 162013 | 8523323 ~ 8523546 (-) |
| G110896 | NA | other | downstream | 35220 | 8324960 ~ 8325680 (-) |
| G110467 | NA | other | downstream | 861763 | 7498670 ~ 7499137 (-) |
| hoxa13b | hoxa13b | other | downstream | 886214 | 7472033 ~ 7474734 (-) |
| G111044 | NA | other | upstream | 160692 | 8522002 ~ 8522761 (-) |
| LOC110519098 | LOC106594466 | other | upstream | 410226 | 8769881 ~ 8782987 (-) |
