XLOC_002090 (hrh2b)


Basic Information

Item Value
gene id XLOC_002090
gene name hrh2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 21899753 ~ 21909696 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004077
ACACAAACGCAAACAGTTTCAGTGTGGTGAACATCAGCTCATGCAGGAATCTGGAGTTTCTACTTCACAGCCATAATGCACCTGCAGAATGAATGACCCTGGGCTGATTCAGCATGAATGTTACTATAATGCCATTTTATAGCATCCGAGAGTAAATGCGTGAGAAAATGAGTTGACGCATGGAGTCCTAAATAAACTAGTTTGGATATTACTGTCACGCAGTACTACAAACATTTCCAAGCTTTCCTATTTCGAAAACTAATAACAATGACAATCAGAGCCCTGTGCTGGGTGGTTCTGGTGGCCTTCATCGCACTGACCATTTGTGGAAACATACTGGTTTGTATGGCCGTGGCCACCAGTCGCCGTCTGCACCAGCTTAGTAGCTGTTTTATACTATCCCTGGCCGTGACAGACCTACTTCTAGGTTTGCTAGTACTGCCACTTTCTGCCATGCTGGAACTGCGCAATGGAAAGTGGCCTCTTGGGGGTGTTTTCTGCAATATCTACATCTCTATGGATGTAATGCTGAGCAGTGCTTCGATCCTGACTCTACTGGCCATTAGTGTTGACCGCTACCTTGCCATTTCTAACCCGCTCTTCTATCCCAGGAGGGTCACACCTCGACGGGTGGCGATCGCTCTGACTGCGATCTGGACGTGCTCTCTAGCGGTGTCCTTTGTGTCTATAAACCTAGGCTGGAACTCACCGGACTTCAGAGTGCAGAATCTGGACTGGAGCATGTGGGATGAGGGAGAGGAAGGCAGGACCTGCCGCTACGAGTGGAATAATAATTATGTGCTGCTGAAAGCGTTTGGAATCTTCTACCTCCCTCTGCTGGTTATGTGTGGAATGTACCATCGCATATTCTGTGTTGCACGGGAACAGGTGCGGCGTATTCGGGCAGCCACTCCATCATCTGCACAGGTTGCAAATGCAGCTGCCACTGCACGGGAACATAAAGCCACAGTGACCCTCGCTGCAGTGCTTGGTGCTTTCATCATTTGCTGGTTCCCCTATTTCACCTACTTCACATACATGGGAATGTGGGCGATTCACCCAAACAAACTGACCCACTCCATTGTTCTTTGGTTGGGATACCTCAACTCTGCACTGAATCCCATCCTTTATCCAGCCTTAAACAGGGATTTCCGTCAGGCATGTGGACAGTTGCTCTGTAGATGTGGGAAAAGGGGAGATTTCAACACTTCCAGAAGAAAGACATTCATAGCTTTAGGTACCATTAAAGTCATTAAAGGCTCACTGGCCCACTAGAACTCATCTTACACTGCAGGGACAATGACAGCATCATCAAAACAACTATATGACTGATCAATGACTATTAAATATTGTCGGACTGAACAATAGAACTTCAAAATGAAAGAGATTTTGTTCGCTCATACTATATTTGGTGAAAAATACACATTATTCTAATAATATTATTCTGCTGTGTGATAATCTTCATTCGTTTGTATTTGCTGAATAATTTGTtgctttaccttttttttttttttgatatgcaAGATACATTTTGTCTGTTTAGTAAAGTGATGCTATTCTAACAGTTTTGTTAGGTTCTCTCTCTACAGTATAGGGGTAATGTACATACTTTACTTTTTATAAACGTTTTCCCAAAGCATTCTTTGGTGCCAGAGTAAGATTAAAGAGATGACATGAAA

Function

symbol description
hrh2b Predicted to enable G protein-coupled serotonin receptor activity and neurotransmitter receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger and chemical synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite. Predicted to be integral component of plasma membrane. Orthologous to human HRH2 (histamine receptor H2).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007187 G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0007165 signal transduction biological_process
GO:0030425 dendrite cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0030594 neurotransmitter receptor activity molecular_function
GO:0004993 G protein-coupled serotonin receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070928-20 Predicted to enable G protein-coupled serotonin receptor activity and neurotransmitter receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger and chemical synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite. Predicted to be integral component of plasma membrane. Orthologous to human HRH2 (histamine receptor H2).

Ensembl:

ensembl_id ENSDARG00000057479

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004077 True 1679 mRNA 0.44 3 21899753 21909696

Neighbor

gene id symbol gene type direction distance location
XLOC_002089 cbln17 coding upstream 29296 21867307 ~ 21870457 (+)
XLOC_002083 pcdh1g1 coding upstream 79620 21650828 ~ 21820133 (+)
XLOC_002088 NA coding upstream 154248 21745262 ~ 21745505 (+)
XLOC_002087 pcdh1g14 coding upstream 170507 21726853 ~ 21729246 (+)
XLOC_002086 pcdh1g13 coding upstream 174441 21722892 ~ 21725312 (+)
XLOC_002092 NA coding downstream 4939 21914635 ~ 21944085 (+)
XLOC_002093 NA coding downstream 8181 21917877 ~ 21945344 (+)
XLOC_002094 NA coding downstream 26582 21936278 ~ 21949408 (+)
XLOC_002095 BX005027.1 coding downstream 70851 21980547 ~ 21980665 (+)
XLOC_002096 kcnip1b coding downstream 94054 22003750 ~ 22031921 (+)
XLOC_002085 CT737184.1 non-coding upstream 225295 21670831 ~ 21674458 (+)
XLOC_002081 NA non-coding upstream 356191 21542521 ~ 21543562 (+)
XLOC_002077 BX465186.1 non-coding upstream 494782 21397320 ~ 21404971 (+)
XLOC_002075 BX004886.1 non-coding upstream 663075 21236564 ~ 21236678 (+)
XLOC_002098 NA non-coding downstream 224837 22134533 ~ 22139340 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location