XLOC_021002


Basic Information

Item Value
gene id XLOC_021002
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 14299800 ~ 14301873 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042363
GACTGAACACAGGCATCTCCTGTACaaATATGCGGTTATGTCATTGCCTTGACCTGCTGCATTGTAGCAATGGGATGTGTTGTACATTGGAAGGACTGCTGCTGTTCAGCCACCAAAAGTCCAGAAAGTAAAGATGATGGAGAGGAAACGCATGATCTGTTGAGAAAGCCAGACAAGAAACAAGGAGAAGAACATGAGATGGACCAGTTTAAAGATGAGGACTCAACAAAGAGACATTCAAATCAGGATGATAAAACAGAGTAGATGGTAAAGTAAAGATCAAATCCAATGGTCTGCTTGTTAATTTGCTATATCTGAAACTCTTGCTCTCACTTTCTCATATTatcctttaaaatgttaatagttATTGCATACTTTGTGTTTGCTTGTAATCTTGCTTGTATCATTGCAGATTAAGTAAAACATCATTTATGGTATGAGTTTTGTAAAATAGTAGTTTTATTGAGGATATCTTTGATTATCCTGGCTTACTATTTTGGTGTTTTGGTTTTGCCTTAGCatgtatatattttcttttttctagtATGCTTGGATGTTTTGCTATTCAGAGTAAAAGTGAAAGCATTAACCAGCTTGCCTCTGGGTATTTTGTATGCAACTGTAGGTTTTTAGGATTGTTTAAATCAATACTCATTGTGTTAAGACAGGTTTGTTTCTGAATGTAGAAATACAAAACCTGCAAGTTCTTTTCCTTTTTCATTATTGTTTCTGTTTTAAGGGGCAGCAAATGTGTTTAATTATTACACCGAAATTAGAGTAAAGTTCCTCGCCAATATCAacttagaaaatagcaacttttcactTTTAGTCAGTCTTAGTACATGTAACTACAgtaaagtcaag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042363 True 864 lncRNA 0.35 2 14299800 14301873

Neighbor

gene id symbol gene type direction distance location
XLOC_021001 NA coding downstream 1198 14275746 ~ 14298602 (-)
XLOC_021000 si:ch211-246m6.5 coding downstream 27101 14178813 ~ 14272699 (-)
XLOC_020999 si:ch211-246m6.5 coding downstream 138491 14145510 ~ 14161309 (-)
XLOC_020998 si:ch211-246m6.4 coding downstream 171084 14127472 ~ 14128716 (-)
XLOC_020997 aox5 coding downstream 184484 14083729 ~ 14115316 (-)
XLOC_021003 si:ch73-338d8.5 coding upstream 2804 14304677 ~ 14309817 (-)
XLOC_021004 NA coding upstream 30577 14332450 ~ 14334135 (-)
XLOC_021005 si:dkeyp-122a9.1 coding upstream 36305 14338178 ~ 14346575 (-)
XLOC_021006 si:dkeyp-122a9.2 coding upstream 48966 14350839 ~ 14361022 (-)
XLOC_021007 lrp1ba coding upstream 62079 14363952 ~ 14739491 (-)
XLOC_020996 BX649296.1 non-coding downstream 280078 14019604 ~ 14019722 (-)
XLOC_020995 BX649510.1 non-coding downstream 353733 13945953 ~ 13946067 (-)
XLOC_020993 CT990618.1 non-coding downstream 583215 13711434 ~ 13716585 (-)
XLOC_020992 NA non-coding downstream 606173 13668985 ~ 13693627 (-)
XLOC_021008 CR352252.1 non-coding upstream 391239 14693112 ~ 14693228 (-)
XLOC_021009 BX936391.1 non-coding upstream 463125 14764998 ~ 14787062 (-)
XLOC_021010 NA non-coding upstream 578942 14880815 ~ 14883529 (-)
XLOC_021012 NA non-coding upstream 769781 15071654 ~ 15209243 (-)

Expression


Co-expression Network