XLOC_021005 (si:dkeyp-122a9.1)


Basic Information

Item Value
gene id XLOC_021005
gene name si:dkeyp-122a9.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 14338178 ~ 14346575 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041303
AACAGCTCCACATCTGAGCGAGACAGATATATGTATAAATGCAACTGAGTTGGGTGTGGAATGTGGATATCTGCCAGCAAAAGTCAGAGGTGTAGACGTGGCAGGGGCGAAAGAGGGGGCAGCAACTGTCATCTGTCAGTGACATATACAAACTAATAATAAGAGGTAAAAGATCCGACCTTCACATTTAAACTTCTCTTGAGGATCTTGTCCACCCAAATACAAACCTTTccatacaacaacaaaaaaaagacaaaaacatccCCAAAATATCAAAAAGAGCTATGTGCAAACAAGGCATGACTTCCTTGAAAAACAATATAGGCTCTTTATTTAAGAGCGCACTGGCCAAAACTGATGTTTTCAAATCTTTTCCAGCAAGTCTTTTGTTGTTTCCACTTGATTTTCTGACCGATAAAAAATTTTCATGTCCGTGTAAttcgagtgaaaaaaaaaactgcctaaCAGTCTTTGTCTTCGTTGCACCTGCTCTTTTCAGCTTTGCTTTAACCTTTATTTATCTGTGTCTAAAACCTAAAAGAGAAGAGGGAAAGGAAGAAGTCAACAGAAATGATGATGAAGAAAAAGACAAgataaaagaaaataagaaaaaaaataaatacctcAAGTATTGTGGTTATATAGCCATTAGCCTGATTCCACTTGTCCTGTGGATCATTCTAATGCTGTTAGATGGGGATTATGTTGCCTGCATTGAAACACAATGGAAAGGACAGTACACATTTGATGACAAGCTGCAAATAAAATGGTGTAAACCACTTGACTTCATCCCTGAAAAAAATGAGACTGAATATAAAAACCTGACGCTTGGATACATTGAAAAATCACAGAAGTCTGGTTATATCTGcctcatttccttcagcttaattcTCGCAGTCATAGTGGGTGTTTA

Function

symbol description
si:dkeyp-122a9.1 Predicted to enable cation channel activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005261 cation channel activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-651 Predicted to enable cation channel activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000091954

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041303 True 913 mRNA 0.37 4 14338178 14346575

Neighbor

gene id symbol gene type direction distance location
XLOC_021004 NA coding downstream 4043 14332450 ~ 14334135 (-)
XLOC_021003 si:ch73-338d8.5 coding downstream 28361 14304677 ~ 14309817 (-)
XLOC_021002 NA coding downstream 36305 14299800 ~ 14301873 (-)
XLOC_021001 NA coding downstream 39576 14275746 ~ 14298602 (-)
XLOC_021000 si:ch211-246m6.5 coding downstream 65479 14178813 ~ 14272699 (-)
XLOC_021006 si:dkeyp-122a9.2 coding upstream 4264 14350839 ~ 14361022 (-)
XLOC_021007 lrp1ba coding upstream 17377 14363952 ~ 14739491 (-)
XLOC_021008 CR352252.1 coding upstream 346537 14693112 ~ 14693228 (-)
XLOC_021009 BX936391.1 coding upstream 418423 14764998 ~ 14787062 (-)
XLOC_021010 NA coding upstream 534240 14880815 ~ 14883529 (-)
XLOC_020996 BX649296.1 non-coding downstream 318456 14019604 ~ 14019722 (-)
XLOC_020995 BX649510.1 non-coding downstream 392111 13945953 ~ 13946067 (-)
XLOC_021012 NA non-coding upstream 725079 15071654 ~ 15209243 (-)
XLOC_021013 NA non-coding upstream 807569 15154144 ~ 15155315 (-)

Expression


Co-expression Network