XLOC_021006 (si:dkeyp-122a9.2)


Basic Information

Item Value
gene id XLOC_021006
gene name si:dkeyp-122a9.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 14350839 ~ 14361022 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041304
CTGGAGAAGATGTCGTTGCCTGAGCAAATGACAAACAATCTGGAAAAGATGAAAAGTGGATTTGGCACATTtccatttactattgcattattcgGATTGGAAATGTTAATGGATCGTGAATTTTCTTGCCCGTGTGACCCAGGTCTCAACGTGACCCTGATCGTCTTCCTCTTCGTCGGTCCTGCTTTCCTGGCTCTGACTGTGTTGGTGTTCATTCGGAGACCTTGTAAACGTAAATCGCAGAGTTCCGCTGAGGTCTTTTCATTTTGTCTGATTCCTCCTTCACTGTGGATCTTTCTGCTGTTGTTTGAGGGGGAATATTTGGCTTGTGGTTTGGCGCACTGGGAAGGAGACTACGTTTTGGATGAAGGGCGTCAGATTAAATGGTGCAAACCCAGTGGATTGAATGACAACAAAACGATCAGAACCGACTTGCTAGAACTGACTGAAAAGGTCACTTTCTACTCAAGGCTTTCTGCTTTAGCTCTGCTGTCCCTCCTCTGCATTTCTTTCATGACTGTCCTCGTTTGGAGTGACTGTAAAACCAGAcctctggagcagctgaagaagTGGGATGAGCAAACACAACAAACATCTCTAAGCGGCACGGAAGCAGAACTACAGCAGCCACCAGTTTGAACACTTCAAAAACAACCAGTATAGGTTTATGCTTTTATCTGGAACAACTTTTGAATTTTGGAAAATTTGTCACTATACAGGATAT

Function

symbol description
si:dkeyp-122a9.2 Predicted to enable cation channel activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005261 cation channel activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-745 Predicted to enable cation channel activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000093116

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041304 True 724 mRNA 0.44 2 14350839 14361022

Neighbor

gene id symbol gene type direction distance location
XLOC_021005 si:dkeyp-122a9.1 coding downstream 4264 14338178 ~ 14346575 (-)
XLOC_021004 NA coding downstream 16704 14332450 ~ 14334135 (-)
XLOC_021003 si:ch73-338d8.5 coding downstream 41022 14304677 ~ 14309817 (-)
XLOC_021002 NA coding downstream 48966 14299800 ~ 14301873 (-)
XLOC_021001 NA coding downstream 52237 14275746 ~ 14298602 (-)
XLOC_021007 lrp1ba coding upstream 2930 14363952 ~ 14739491 (-)
XLOC_021008 CR352252.1 coding upstream 332090 14693112 ~ 14693228 (-)
XLOC_021009 BX936391.1 coding upstream 403976 14764998 ~ 14787062 (-)
XLOC_021010 NA coding upstream 519793 14880815 ~ 14883529 (-)
XLOC_021011 elfn2a coding upstream 648146 15009168 ~ 15010688 (-)
XLOC_020996 BX649296.1 non-coding downstream 331117 14019604 ~ 14019722 (-)
XLOC_020995 BX649510.1 non-coding downstream 404772 13945953 ~ 13946067 (-)
XLOC_021012 NA non-coding upstream 710632 15071654 ~ 15209243 (-)
XLOC_021013 NA non-coding upstream 793122 15154144 ~ 15155315 (-)

Expression


Co-expression Network