Gene
RNA
| Item | Value |
|---|---|
| gene id | G126386 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 26049358 ~ 26049596 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposon-derived protein PEG10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU145895 | True | 239 | lncRNA | 0.40 | 1 | 26049358 | 26049596 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539098 | LOC106605503 | coding | downstream | 259099 | 25669026 ~ 25790259 (-) |
| si:ch211-198c19.1 | LOC106605502 | coding | downstream | 588476 | 25459554 ~ 25460882 (-) |
| LOC110539072 | cep162 | coding | downstream | 605842 | 25428983 ~ 25443516 (-) |
| LOC110533704 | cep162 | coding | downstream | 621659 | 25417440 ~ 25427699 (-) |
| LOC110538828 | grik2 | coding | downstream | 938775 | 24862906 ~ 25110583 (-) |
| LOC110539162 | LOC106605511 | coding | upstream | 501236 | 26550832 ~ 26559134 (-) |
| LOC118938772 | cg024 | coding | upstream | 527357 | 26576953 ~ 26579337 (-) |
| ggctb | ggct | coding | upstream | 536195 | 26585791 ~ 26588645 (-) |
| LOC110539269 | LOC106579366 | coding | upstream | 579980 | 26629576 ~ 26640996 (-) |
| LOC110539285 | LOC106579350 | coding | upstream | 592362 | 26641958 ~ 26675649 (-) |
| G126381 | NA | non-coding | downstream | 7262 | 26041892 ~ 26042096 (-) |
| G126327 | NA | non-coding | downstream | 44195 | 26004747 ~ 26005163 (-) |
| G126320 | NA | non-coding | downstream | 47038 | 26002099 ~ 26002320 (-) |
| G126297 | NA | non-coding | downstream | 65067 | 25984058 ~ 25984291 (-) |
| G126290 | NA | non-coding | downstream | 73746 | 25973457 ~ 25975612 (-) |
| G126775 | NA | non-coding | upstream | 54526 | 26104122 ~ 26113943 (-) |
| G126890 | NA | non-coding | upstream | 243683 | 26293279 ~ 26320696 (-) |
| G126928 | NA | non-coding | upstream | 282200 | 26331796 ~ 26331999 (-) |
| G126929 | NA | non-coding | upstream | 282432 | 26332028 ~ 26332285 (-) |
| G126930 | NA | non-coding | upstream | 283516 | 26333112 ~ 26333341 (-) |
| G125305 | NA | other | downstream | 1272731 | 24775220 ~ 24776627 (-) |
| LOC110538887 | LOC106605647 | other | downstream | 1514829 | 24531424 ~ 24540898 (-) |
| G125043 | NA | other | downstream | 1724522 | 24324580 ~ 24324836 (-) |
| G125003 | NA | other | downstream | 1779222 | 24269226 ~ 24270136 (-) |
| LOC110538705 | LOC106577653 | other | downstream | 1887915 | 24144519 ~ 24172836 (-) |
| G127083 | NA | other | upstream | 512018 | 26561614 ~ 26562127 (-) |
| LOC110485245 | ubr5 | other | upstream | 1221664 | 27231538 ~ 27278158 (-) |
| G129250 | NA | other | upstream | 1716561 | 27766157 ~ 27766532 (-) |
| LOC110485663 | LOC106579570 | other | upstream | 2047086 | 27933389 ~ 28149986 (-) |
