G128474


Basic Information

Item Value
gene id G128474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28180682 ~ 28181001 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148171
cactcactaccgagttccaaactgcctctggaagcaacattagcacaataactgttcgtcaggagcttcatgaaatgggtttccatggccgagcagccgcacacaagcctaagattaccatgcgtaatgccaaacgtcggctggagtagtgtaaagcttgcTCACATTGGACTCTAGCAGTGGAAACGcgatctctggagtgatgaatcactcttcaccatctggaagttcgatggacgaatctgggtttggcagatgccaggagaacgctacctgccccaatgcatagtgccaactgtaaagtttgatggaggaggaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148171 True 320 lncRNA 0.49 1 28180682 28181001

Neighbor

gene id symbol gene type direction distance location
LOC110485672 LOC106605394 coding upstream 477 28171846 ~ 28180205 (+)
LOC110485682 LOC106605395 coding upstream 9359 28165160 ~ 28171323 (+)
LOC110534576 dpys coding upstream 270696 27907789 ~ 27909986 (+)
LOC110485628 LOC106605483 coding upstream 502668 27651611 ~ 27678014 (+)
LOC110485563 LOC106579093 coding upstream 761517 27409765 ~ 27419165 (+)
ddr1 LOC106605397 coding downstream 13561 28194562 ~ 28250766 (+)
LOC110485735 LOC106605407 coding downstream 89250 28270251 ~ 28280280 (+)
LOC110485723 LOC106605400 coding downstream 100111 28281112 ~ 28296740 (+)
si:dkeyp-77h1.4 LOC106579702 coding downstream 116201 28297202 ~ 28318817 (+)
ino80e ino80e coding downstream 150732 28331733 ~ 28334614 (+)
G128459 NA non-coding upstream 39777 28140278 ~ 28140905 (+)
G128438 NA non-coding upstream 87684 28092418 ~ 28092998 (+)
G128431 LOC106605392 non-coding upstream 95902 28084168 ~ 28084780 (+)
G128423 NA non-coding upstream 106075 28073761 ~ 28074607 (+)
G128531 NA non-coding downstream 83193 28264194 ~ 28265454 (+)
G128546 NA non-coding downstream 123483 28304484 ~ 28304997 (+)
G128549 NA non-coding downstream 130825 28311826 ~ 28382924 (+)
G128561 NA non-coding downstream 198781 28379782 ~ 28380102 (+)
G128436 NA other upstream 91237 28088647 ~ 28089445 (+)
G128185 NA other upstream 463519 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 877127 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 990089 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 1020037 27147880 ~ 27175747 (+)
G128490 NA other downstream 69841 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 751055 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 758898 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 1296616 29424822 ~ 29478401 (+)
G129155 NA other downstream 1303632 29484633 ~ 29485130 (+)

Expression


Co-expression Network