G129145


Basic Information

Item Value
gene id G129145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29478712 ~ 29480636 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148901
atttaatcaatttaagaataaggctctaacataacaaaatgtggaaataatcaaggggtctgaatactttccgaaggcactgtaagtgttaaAACAGTGCAGTGTTTATAACGGGTCCAACTGTTTACAAAAAGAACGTGGGACTGGGCTAAATACAAAAGGATTTGCATTAACATTAGCATTATCCAATGTGAGAGGtttaggcctagattcaatcagaccCATTGTTAATCGGCACTAGCCAACAACCCCAGAATGAttccaaacacatttaaaaagaAAGGGAAAGTCATTGAGTTACATCTCAGAAAACACAACACTAAAGTATACAACATAATATTACTTCAGTACAAAGCAAAAATGTAATAGCCTAACAATGTCAGGTGATTAGGTGATCTTCTAGGCCAATATAGCAGTAACCTCAAGGGCTGGAGGTGGGGCCAAGAGTAATAATCTGGAGGGAGGTGATGCTATAGGCCAATATAGGCCAAATataaagagagggtgagggaggattGATAGATCCAATAGAATCCAATCCAATAGAATCCTTCTGCGTGCCAACAGGGAGGCAAAGGCAATGGCATCTAGCTGTCTATTGGTCAGGGAAGGATTGTTGTCTGGTACTCCAAAAATTGCAATTTCTGCACTAGGCTGCAACTCTATATCCAATGCTTCAGAAAGGGTTTTAAATATAGTGGACCAGTAGTCTGCCAGACTGGGACAAGACCAGAATATGTGAGTCCAATGCGCCATGGAGCTTTTACACCTGTGACATGTACCATCAATATTTGGGTAGAATTTGGAGAGTCTGGCCTTACTGAAATGGATACCTTAAACTGTATAAGGCCGAGCCGGGCACAAGAGGAGCTTCCATTTACCCCAAGTAAGGCGCTATTCTAGACTTTGTCCGAGGTCTCTCAACCAAGTCCCTTTTCCCTCTCAGATGACGGGTTATCAAGGGACATGATTATCAAACAAATAAATACATGGAAATACCTAAATACACTTGAATGGGATAATTACATTTGATAGCGAAGTCATCAAAATTGGCAAAGGTGCCATCTATATAAAGGTCACTAAACTTAGTAAGGCCATTCCTCTGCCACAGACTTCAAGCTGAATTTAGATTGATTGGATGGAAGAGGTGATTATTACATATAGGATCTTGAATAGAGAAATCACAGAATTTGACGGAATTAAGGCCAAATTTTAAGAGTATTGACAACAATTGGATAGGATGTATAGCGCAAAGCTGAAAGAGTAAGATTGGAGGTGACTAAAGCTGACAAAGAGGAAGAGAAATTGGAGATGACTTCTGTTTGACACCAGTCAGTTTCTGGGGTGCGAAGCCAGTAAACAATATTTTGTATATTCGCTGCCCAGTAATAATACATAACATTAGGAAGGGCTAgttaACTGCCATGAAGCCACACCGTCCCACTGGCGTTAGAAGTTCAGaatgagaaagtgtaggctatatagaaataatgacgcTCAAATTGAAAATTTTACTAAATAATGAGGCtttctatcagcctaatcgaGGTGAAGATTACATCTCACAATCTCGTGTTTATATTTGTAAACAAGGCTAcatgggatttctcttaatgcGACGCTGTGCAGCCAATTGTGGATTTGGCAGCTCTAGCGCAGTTACACCtccgacaccgccaaaacaaccaCTATGCAGATGTCGGCTGAAGTGGACCTGAATGAATAGAGCCATTAGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106910967

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU148901 True 1736 lncRNA 0.40 3 29478712 29480636

Neighbor

gene id symbol gene type direction distance location
LOC110534631 LOC106580029 coding upstream 311 29424822 ~ 29478401 (+)
LOC110486083 LOC106605428 coding upstream 60415 29369835 ~ 29418297 (+)
LOC118937130 NA coding upstream 245991 29231578 ~ 29232721 (+)
LOC100136336 stea4 coding upstream 282072 29172098 ~ 29196640 (+)
LOC110486065 NA coding upstream 307593 29164798 ~ 29171119 (+)
LOC110486208 NA coding downstream 64608 29545045 ~ 29553946 (+)
LOC118944146 NA coding downstream 113528 29594164 ~ 29594216 (+)
LOC118936731 dcst2 coding downstream 174239 29654875 ~ 29662028 (+)
LOC110486269 LOC106580132 coding downstream 198571 29679207 ~ 29685150 (+)
LOC110486279 LOC106605442 coding downstream 205219 29685855 ~ 29697686 (+)
G129154 NA non-coding upstream 2354 29476081 ~ 29476358 (+)
G129153 NA non-coding upstream 2722 29475772 ~ 29475990 (+)
G129151 NA non-coding upstream 4192 29474253 ~ 29474520 (+)
G129149 NA non-coding upstream 5222 29473282 ~ 29473490 (+)
G129099 NA non-coding upstream 111381 29366974 ~ 29367331 (+)
G129146 NA non-coding downstream 330 29480966 ~ 29482856 (+)
G129156 NA non-coding downstream 5130 29485766 ~ 29486092 (+)
G129157 NA non-coding downstream 5636 29486272 ~ 29486741 (+)
G129160 NA non-coding downstream 8317 29488953 ~ 29489241 (+)
G129165 NA non-coding downstream 15168 29495804 ~ 29497706 (+)
G128853 LOC106605419 other upstream 497424 28939899 ~ 28981288 (+)
LOC110485990 LOC106579931 other upstream 534322 28931988 ~ 28951235 (+)
G128490 NA other upstream 930797 28250842 ~ 28547915 (+)
G128436 NA other upstream 1389267 28088647 ~ 28089445 (+)
G129155 NA other downstream 3997 29484633 ~ 29485130 (+)
G130308 NA other downstream 119390 29600026 ~ 29641096 (+)
G130414 NA other downstream 308940 29789576 ~ 29789831 (+)
G131491 NA other downstream 1219546 30700182 ~ 30700623 (+)

Expression


Co-expression Network