G130290


Basic Information

Item Value
gene id G130290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29546285 ~ 29546516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150165
CCTACCTGCACAATTATCTGGATGATAAAATAACAGTTTCTTTCAGACAGAAATTGTTTCTCATCAAGTAAGCAACCAGGTTAATTCCCAACGTCCACTGTGTGTATTtggcttttctttaaaaaaacgtTAGTCTACCTGTATGATACATCATGGAGAAAAGACCAATCAAATTTGGGATTATTCTTACTTTGGCTGTTTCAGGTATGGCAGAAacgtatctatctatcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150165 True 232 lncRNA 0.44 1 29546285 29546516

Neighbor

gene id symbol gene type direction distance location
LOC110534631 LOC106580029 coding upstream 67884 29424822 ~ 29478401 (+)
LOC110486083 LOC106605428 coding upstream 127988 29369835 ~ 29418297 (+)
LOC118937130 NA coding upstream 313564 29231578 ~ 29232721 (+)
LOC100136336 stea4 coding upstream 349645 29172098 ~ 29196640 (+)
LOC110486065 NA coding upstream 375166 29164798 ~ 29171119 (+)
LOC118944146 NA coding downstream 47648 29594164 ~ 29594216 (+)
LOC118936731 dcst2 coding downstream 108359 29654875 ~ 29662028 (+)
LOC110486269 LOC106580132 coding downstream 132691 29679207 ~ 29685150 (+)
LOC110486279 LOC106605442 coding downstream 139339 29685855 ~ 29697686 (+)
LOC110486333 LOC106605448 coding downstream 219166 29765682 ~ 29768627 (+)
LOC110486208 NA non-coding upstream 994 29545045 ~ 29553946 (+)
G130265 NA non-coding upstream 23484 29521303 ~ 29522801 (+)
G129176 NA non-coding upstream 34152 29511836 ~ 29512133 (+)
G129165 NA non-coding upstream 48579 29495804 ~ 29497706 (+)
G129160 NA non-coding upstream 57044 29488953 ~ 29489241 (+)
G130291 NA non-coding downstream 143 29546659 ~ 29547042 (+)
G130282 NA non-coding downstream 7891 29554407 ~ 29554905 (+)
G130297 LOC106605438 non-coding downstream 31145 29577661 ~ 29581410 (+)
G130345 LOC106581475 non-coding downstream 117494 29664010 ~ 29671945 (+)
G130335 LOC106580167 non-coding downstream 180035 29726551 ~ 29744867 (+)
G129155 NA other upstream 61155 29484633 ~ 29485130 (+)
G128853 LOC106605419 other upstream 564997 28939899 ~ 28981288 (+)
LOC110485990 LOC106579931 other upstream 601895 28931988 ~ 28951235 (+)
G128490 NA other upstream 998370 28250842 ~ 28547915 (+)
G130308 NA other downstream 53510 29600026 ~ 29641096 (+)
G130414 NA other downstream 243060 29789576 ~ 29789831 (+)
G131491 NA other downstream 1153666 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 1201539 30748055 ~ 30749954 (+)

Expression


Co-expression Network