Gene
RNA
| Item | Value |
|---|---|
| gene id | G131304 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 30531809 ~ 30532025 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC103399007, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU151280 | True | 217 | lncRNA | 0.46 | 1 | 30531809 | 30532025 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486625 | LOC106605474 | coding | upstream | 1463 | 30518443 ~ 30530346 (+) |
| LOC110534660 | LOC106605472 | coding | upstream | 26690 | 30485372 ~ 30505119 (+) |
| decr1 | decr1 | coding | upstream | 172114 | 30352768 ~ 30359695 (+) |
| LOC110486570 | LOC106580396 | coding | upstream | 181839 | 30326490 ~ 30349970 (+) |
| LOC110486559 | LOC106605466 | coding | upstream | 210688 | 30314585 ~ 30321121 (+) |
| LOC110486681 | LOC106580557 | coding | downstream | 803 | 30532828 ~ 30542573 (+) |
| si:dkey-22o22.2 | LOC106605377 | coding | downstream | 85978 | 30618003 ~ 30746151 (+) |
| LOC110486724 | LOC106581338 | coding | downstream | 266755 | 30798780 ~ 30807966 (+) |
| plekhf2 | plekhf2 | coding | downstream | 289751 | 30821776 ~ 30844299 (+) |
| LOC110534679 | LOC106605381 | coding | downstream | 319272 | 30851297 ~ 30856046 (+) |
| G131295 | NA | non-coding | upstream | 43844 | 30487745 ~ 30487965 (+) |
| G131293 | NA | non-coding | upstream | 44870 | 30486700 ~ 30486939 (+) |
| G131290 | NA | non-coding | upstream | 52832 | 30478752 ~ 30478977 (+) |
| G131286 | NA | non-coding | upstream | 57098 | 30474503 ~ 30474711 (+) |
| G131315 | NA | non-coding | downstream | 16210 | 30548235 ~ 30548448 (+) |
| G131279 | LOC106605477 | non-coding | downstream | 25541 | 30557566 ~ 30572768 (+) |
| G131406 | NA | non-coding | downstream | 48947 | 30580972 ~ 30581270 (+) |
| G131416 | NA | non-coding | downstream | 57888 | 30589913 ~ 30590180 (+) |
| G131421 | NA | non-coding | downstream | 60640 | 30592665 ~ 30593696 (+) |
| G130414 | NA | other | upstream | 741978 | 29789576 ~ 29789831 (+) |
| LOC110486279 | LOC106605442 | other | upstream | 837958 | 29685855 ~ 29697686 (+) |
| G130308 | NA | other | upstream | 890713 | 29600026 ~ 29641096 (+) |
| G129155 | NA | other | upstream | 1046679 | 29484633 ~ 29485130 (+) |
| LOC110534631 | LOC106580029 | other | upstream | 1053679 | 29424822 ~ 29478401 (+) |
| G131491 | NA | other | downstream | 168157 | 30700182 ~ 30700623 (+) |
| G131517 | ccne2 | other | downstream | 216030 | 30748055 ~ 30749954 (+) |
| LOC110534710 | LOC106605356 | other | downstream | 759445 | 31262054 ~ 31294577 (+) |
| eaf1 | LOC106581241 | other | downstream | 828411 | 31360408 ~ 31366322 (+) |
| G132342 | LOC100136303 | other | downstream | 1325623 | 31834170 ~ 31887572 (+) |
