G131493


Basic Information

Item Value
gene id G131493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30708874 ~ 30709484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151480
TCTATCTCATTCTCCAAGTCTTCTGTTTCCtggtctctctcgctgtattCTCTTCATGTATTCTTGTTTTTGGTGTGGTTTGTCATTATAGTTTGCTAGCTTGATTGTTTGTCAGTATTCACAGCTtatcatactgtatgtagcccTACAACTGTTCAATGTAGGCCATTGTTTAAAAGTGAATATCCTCTGTAAGATTTTACAGTCCCGTTTGGGAGTGcagaggtacagttgaagtcggaaatttacatacaccttagccaaatacatttaaactcagtttttcacaatttctgacatttaatcctagtaaaaattccctgttttagaccagttattttaagaatgtgaaatgtcagaataatagtcgagagaattatttatttcagcttttatttctttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttggtagcattgcctttaaattgtttaacttgtgtcaaacgtttcgggtagccttccacaagcttcccacaataagtttgattaattttggcccattcctcctgacagagctggtgtaaatgagttaggtttgtaggcctccttgctcgcacacgctttttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151480 True 611 lncRNA 0.44 1 30708874 30709484

Neighbor

gene id symbol gene type direction distance location
LOC110486681 LOC106580557 coding upstream 166301 30532828 ~ 30542573 (+)
LOC110486625 LOC106605474 coding upstream 178528 30518443 ~ 30530346 (+)
LOC110534660 LOC106605472 coding upstream 203755 30485372 ~ 30505119 (+)
decr1 decr1 coding upstream 349179 30352768 ~ 30359695 (+)
LOC110486570 LOC106580396 coding upstream 358904 30326490 ~ 30349970 (+)
LOC110486724 LOC106581338 coding downstream 89296 30798780 ~ 30807966 (+)
plekhf2 plekhf2 coding downstream 112292 30821776 ~ 30844299 (+)
LOC110534679 LOC106605381 coding downstream 141813 30851297 ~ 30856046 (+)
LOC110534689 LOC106605368 coding downstream 164249 30873733 ~ 30891386 (+)
LOC110486784 NA coding downstream 427324 31136808 ~ 31146454 (+)
G131448 NA non-coding upstream 97954 30610691 ~ 30610920 (+)
G131424 NA non-coding upstream 113437 30595237 ~ 30595437 (+)
G131421 NA non-coding upstream 115178 30592665 ~ 30593696 (+)
G131416 NA non-coding upstream 118694 30589913 ~ 30590180 (+)
G131406 NA non-coding upstream 127604 30580972 ~ 30581270 (+)
G131494 NA non-coding downstream 12 30709496 ~ 30709721 (+)
G131502 NA non-coding downstream 38144 30747628 ~ 30761914 (+)
G131527 NA non-coding downstream 105022 30814506 ~ 30815333 (+)
G131540 NA non-coding downstream 151072 30860556 ~ 30861094 (+)
G131556 NA non-coding downstream 193320 30902804 ~ 30908231 (+)
G131491 NA other upstream 8251 30700182 ~ 30700623 (+)
G130414 NA other upstream 919043 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 1015023 29685855 ~ 29697686 (+)
G130308 NA other upstream 1067778 29600026 ~ 29641096 (+)
G129155 NA other upstream 1223744 29484633 ~ 29485130 (+)
G131517 ccne2 other downstream 38571 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 581986 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 650952 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1148164 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 2457954 33167438 ~ 33169378 (+)

Expression


Co-expression Network