G131517 (ccne2)


Basic Information

Item Value
gene id G131517
gene name ccne2
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30748055 ~ 30749954 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151514
TTAATTTCCATTTCATTTATTCAATACATTTCATGTTCCCATTAGAAAACAGAACATTCAGTTTATGTACATAACATATACACATGGGTATTTACAGTTTAAACATGGTTCTTTGTATACCGCTGCCTCGGCAGGCATCTGCACAACACTGAAGGGTTCAGTTGACAGTCACAGGTTTGCTGGACAGACTGGGTGTTAGAGCCCTCCACTGGAGCCTCTGGGTTCTCAAGTCTTTACAGCACCATACTAGTTCAACTACGGCACCACGGACAGGCTAGCGCAAAACTACGCAACATAACATTTCATATGTAACTgcattataccccccccccccataacaatGTCAAAATCATAAATAACATGCATCCCGTGACTTAAATAGGTTGCCTTCCTTTGGCATTGTTAAAGAACTGAATTCATAGCCCTATGAAGAATGTATATACGGAGATAAAAACATTGTAAGGCTTAAATGAACAAATAAATACAAGTTTAAAATGACATGGTTGTAAATTGGTCCAAGAGGCCTAAAATCAAACTACTGAAGTCAAGTGTTCCAGGAATGTGTTGTGGCAGGAGAATGCACCAGGCACATGGAAGTGAGTCGTTCACAGTGGAGAGAATACATACGTTCAAAAATGGTGCTCAAGATGGTATCGTAAACAGTTAACCCTGCACAACCCTTTCAAAACGGCTCAAATGTTCAAACGTAACCACAGCAAACATCAATACTTCTTTCGGCGTTATTGTACGGCTGAGCTTTCCCAGGAGTACCCAGATTTAGACTAAACAGCACTAAATACATACGATACCACAATGCTAAGAGACTGAGTTGAGCAACTCAACTGTGTATTATGTACCAAATAAAATATTCGCTTTTTAGCTATCAAAACATCCCATGTATTGAGATGTTCAGCTTCAAGTAAAAGAGGGAGCAGCAGACATGTTTCCTATGGAGAAAGATTTGATTCACCTCAAATTATCTCCATGTAAAATTCTAATTCTGGGGATTAAGATTATGAGAACAGGGTTTTTGTTGCAATCATTTGACTAAATAAGTCAATATAGTAACCATGAGCTAATTTCCATGGTTGTACTGCATATATACTCTGATATCCAGCTTGGTATATAAAGTAAAATAACACCTCTTAACATGCTACACAAAGGTGAGTTATTACCAAAAggcaaatttgattggtcacgtGAGGATGAGGTTCCGAAGTTAAGTTTCCCGGCCTCCGACTGGTCAGGCGTGACGTCTAGGGAATTCTCCCTTCATCGGGTTGGCCAGAAGATCAACACGAGGAGACCCTGGGGCTCAGTGATTGGCTGGTTTCTCTGTGCTTTTTGGTGGAGTCAATATCCCTCCTATGGCAGCAGGCGACAGACTGTCTTGGCTGTCCGGTTGCCTCTGGTGAGCGTCGCTCAGCATGGACAGGTAGTCTACGTGGGTCTGGATGTTGTGTCTGTCGTCAGACGTCACTTTCTTAAAGTCTTTGAGCTCTGCTCTGGGACAGGCGCTGACCGTGCGCATGAAGGGGCTCATCCACCGGACACAGGGAGCAATACTATCCCACGTCAGACCTGCACAGAAACAGACATTAgtaactatgtaataacacaggAGGGCTGTGGGGTTCCAGAATGGGGCCA

Function

symbol description
ccne2 Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to be involved in G1/S transition of mitotic cell cycle and regulation of cyclin-dependent protein serine/threonine kinase activity. Predicted to act upstream of or within regulation of cell cycle. Predicted to be part of cyclin E1-CDK2 complex and cyclin E2-CDK2 complex. Predicted to be active in centrosome; cytoplasm; and nucleus. Is expressed in brain; digestive system; head; and proliferative region. Human ortholog(s) of this gene implicated in castration-resistant prostate carcinoma. Orthologous to human CCNE2 (cyclin E2).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151514 True 1650 TUCP 0.56 2 30748055 30749954

Neighbor

gene id symbol gene type direction distance location
si:dkey-22o22.2 LOC106605377 coding upstream 1904 30618003 ~ 30746151 (+)
LOC110486681 LOC106580557 coding upstream 205482 30532828 ~ 30542573 (+)
LOC110486625 LOC106605474 coding upstream 217709 30518443 ~ 30530346 (+)
LOC110534660 LOC106605472 coding upstream 242936 30485372 ~ 30505119 (+)
decr1 decr1 coding upstream 388360 30352768 ~ 30359695 (+)
LOC110486724 LOC106581338 coding downstream 48826 30798780 ~ 30807966 (+)
plekhf2 plekhf2 coding downstream 71822 30821776 ~ 30844299 (+)
LOC110534679 LOC106605381 coding downstream 101343 30851297 ~ 30856046 (+)
LOC110534689 LOC106605368 coding downstream 123779 30873733 ~ 30891386 (+)
LOC110486784 NA coding downstream 386854 31136808 ~ 31146454 (+)
G131494 NA non-coding upstream 38334 30709496 ~ 30709721 (+)
G131493 NA non-coding upstream 38571 30708874 ~ 30709484 (+)
G131448 NA non-coding upstream 137135 30610691 ~ 30610920 (+)
G131424 NA non-coding upstream 152618 30595237 ~ 30595437 (+)
G131421 NA non-coding upstream 154359 30592665 ~ 30593696 (+)
G131527 NA non-coding downstream 64552 30814506 ~ 30815333 (+)
G131540 NA non-coding downstream 110602 30860556 ~ 30861094 (+)
G131556 NA non-coding downstream 152850 30902804 ~ 30908231 (+)
G131719 NA non-coding downstream 306106 31056060 ~ 31056286 (+)
G131720 NA non-coding downstream 349246 31099200 ~ 31099445 (+)
G131491 NA other upstream 47432 30700182 ~ 30700623 (+)
G130414 NA other upstream 958224 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 1054204 29685855 ~ 29697686 (+)
G130308 NA other upstream 1106959 29600026 ~ 29641096 (+)
G129155 NA other upstream 1262925 29484633 ~ 29485130 (+)
LOC110534710 LOC106605356 other downstream 541516 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 610482 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1107694 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 2417484 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2746500 33496454 ~ 33497285 (+)

Expression


Co-expression Network