G131903


Basic Information

Item Value
gene id G131903
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31439397 ~ 31439623 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151956
gatccttgacacgggggcccctcaggggtgtgtacttagtcccctcctgtattccctgtacacccacgactgcgtggccaaacatgacttcaacaccatcattaagtctgctgaagacacaacagtgatcaccgacaacggtgagacggcctatagggaggaggtcagagaactggcagtgtggtgcaaggacaacaacctctccctcaatgtgagcaagactaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU151956 True 227 lncRNA 0.54 1 31439397 31439623

Neighbor

gene id symbol gene type direction distance location
eaf1 LOC106581241 coding upstream 73075 31360408 ~ 31366322 (+)
LOC110486933 can7 coding upstream 123484 31300002 ~ 31315913 (+)
LOC110534710 LOC106605356 coding upstream 144820 31262054 ~ 31294577 (+)
mxtx2 NA coding upstream 178267 31255824 ~ 31261130 (+)
LOC110486889 NA coding upstream 217318 31208985 ~ 31222079 (+)
LOC110486995 atg5 coding downstream 149851 31589474 ~ 31624014 (+)
LOC110534719 LOC106605346 coding downstream 402115 31841738 ~ 31857595 (+)
LOC110487037 LOC106605342 coding downstream 474057 31913680 ~ 31933154 (+)
LOC110487045 LOC106581064 coding downstream 502343 31941966 ~ 31974601 (+)
LOC110487089 LOC106581052 coding downstream 545736 31985359 ~ 31987549 (+)
G131901 NA non-coding upstream 4431 31434736 ~ 31434966 (+)
G131899 NA non-coding upstream 7845 31431318 ~ 31431552 (+)
G131886 LOC106584099 non-coding upstream 43925 31395089 ~ 31395472 (+)
G131847 NA non-coding upstream 51125 31335282 ~ 31388272 (+)
G131835 NA non-coding upstream 143402 31295697 ~ 31295995 (+)
G131909 NA non-coding downstream 22064 31461687 ~ 31461888 (+)
G131914 NA non-coding downstream 39304 31478927 ~ 31479289 (+)
G131917 NA non-coding downstream 45273 31484896 ~ 31485140 (+)
G131918 NA non-coding downstream 46562 31486185 ~ 31486431 (+)
G131923 NA non-coding downstream 65014 31504637 ~ 31504845 (+)
G131517 ccne2 other upstream 689443 30748055 ~ 30749954 (+)
G131491 NA other upstream 738774 30700182 ~ 30700623 (+)
G130414 NA other upstream 1649566 29789576 ~ 29789831 (+)
G132342 LOC100136303 other downstream 418025 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 1727815 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2056831 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 2374410 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 2522794 33962417 ~ 33962658 (+)

Expression


Co-expression Network