XLOC_021141



Basic Information


Item Value
gene id XLOC_021141
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 22770522 ~ 22788728 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042406
gccactttctggaactgttctttgccagactcaaaccccatcgtcatggtcaactccttgTGTCTCAAGTCCTCtgatgtacatggcaagctactggacagactgataacagcgggaaagctgtccgcacagagGTGACTGCAGACTGAAGTTTCGATAGGAAGCAGCAGGTAAAATCAGAAGGGGTCAAACAGCAGTCCAGTCACCCTGCTCTTGTCTCGTGTCAGCCGCAGGAAGAGATAGGAAGCCCAGGAACAAGCTTGATGGATGTCGTGGAGTGCAGAGAGGAAGAAACAACATGGACGGGTGCAGAGGGTCTGGCTATTTTTGCACCGACATCCGGAAATGAGCCACAGTCCTAAGAGGAAGCAGAAAGAGTCGCTTAGCAACCAGAAGCAGGAAAGAAGCTTGTGTTTGTGGACGTAaagaacacaacaacaaaaactagtCTGCTCG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042406 True 456 lncRNA 0.50 2 22770522 22788728

Neighbor


gene id symbol gene type direction distance location
XLOC_021140 nr5a2 coding downstream 51082 22634007 ~ 22719440 (-)
XLOC_021139 BX649292.1 coding downstream 236059 22533586 ~ 22534463 (-)
XLOC_021137 NA coding downstream 247067 22342385 ~ 22523455 (-)
XLOC_021138 camsap2a coding downstream 354185 22345136 ~ 22416337 (-)
XLOC_021136 si:ch211-129c21.1 coding downstream 429834 22316855 ~ 22340688 (-)
XLOC_021142 NA coding upstream 36697 22825425 ~ 22861498 (-)
XLOC_021143 BX936380.2 coding upstream 155733 22944461 ~ 22944585 (-)
XLOC_021144 ptprc coding upstream 188540 22977268 ~ 23067859 (-)
XLOC_021145 nek7 coding upstream 316331 23105059 ~ 23228669 (-)
XLOC_021146 lhx9 coding upstream 450062 23238790 ~ 23253481 (-)
XLOC_021130 NA non-coding downstream 644782 22020509 ~ 22125740 (-)
XLOC_021129 NA non-coding downstream 815356 21950702 ~ 21955166 (-)
XLOC_021128 BX649295.1 non-coding downstream 833034 21933125 ~ 21937488 (-)
XLOC_021149 CR388178.3 non-coding upstream 708087 23496815 ~ 23496929 (-)
XLOC_021151 NA non-coding upstream 804329 23593057 ~ 23596961 (-)
XLOC_021156 BX005398.1 non-coding upstream 963858 23752586 ~ 23754415 (-)

Expression



Co-expression Network