G198258


Basic Information

Item Value
gene id G198258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86906483 ~ 86906780 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU224415
GTTGACTGACCatgttagaataaaaaaaaacttgGCTTAATCATGCTcactctctatccatctgtctctcctctgccggtatgttttgatgtgagagaggaagccagtcccgtcatcgccacctcacccgctcttaagataacctttgGGCCAACTGGGGGTCCAAGGCTAGTTAGTAGACAACGCTAGAGACACTGTAATTGttatgaactgagagaatattagggtagcactgtaattcattaatcatatgctgtctgcctgttcttacctctttccctttcttctACACTTCTCC

Function

NR:

description
PHD finger protein 21A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224415 True 298 lncRNA 0.44 1 86906483 86906780

Neighbor

gene id symbol gene type direction distance location
LOC118942939 NA coding upstream 18457 86887279 ~ 86888026 (+)
zgc:162634 NA coding upstream 21111 86884172 ~ 86898082 (+)
LOC110498682 LOC106561452 coding upstream 33218 86787804 ~ 86873265 (+)
trnag-gcc-9 NA coding upstream 178528 86727885 ~ 86727955 (+)
trnag-gcc-8 NA coding upstream 179267 86727146 ~ 86727216 (+)
LOC110498720 LOC106561456 coding downstream 3690 86910470 ~ 86937217 (+)
si:ch211-266k8.4 LOC106561457 coding downstream 66547 86973327 ~ 87027553 (+)
dkk3b LOC106561478 coding downstream 361154 87267934 ~ 87276184 (+)
far1 LOC106561480 coding downstream 381982 87288762 ~ 87323586 (+)
LOC118937298 ovch2 coding downstream 429017 87335797 ~ 87338557 (+)
G198257 NA non-coding upstream 9 86905951 ~ 86906474 (+)
G198254 NA non-coding upstream 5412 86900870 ~ 86901071 (+)
G198234 NA non-coding upstream 30492 86875703 ~ 86875991 (+)
G198328 NA non-coding downstream 115489 87022269 ~ 87022751 (+)
G198479 NA non-coding downstream 210295 87117075 ~ 87117488 (+)
G198482 NA non-coding downstream 213008 87119788 ~ 87120017 (+)
G198569 NA non-coding downstream 236764 87143544 ~ 87144263 (+)
G198571 NA non-coding downstream 239081 87145861 ~ 87146134 (+)
G197069 NA other upstream 769875 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 1886449 85010068 ~ 85054392 (+)
G195155 NA other upstream 2306159 84596410 ~ 84600324 (+)
G194395 NA other upstream 3346885 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 3781518 83119221 ~ 83124965 (+)
G198417 LOC106561459 other downstream 130731 87037511 ~ 87039236 (+)
G198575 NA other downstream 243422 87150202 ~ 87150490 (+)
G198784 NA other downstream 586843 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 629156 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 960097 87866877 ~ 87867967 (+)

Expression


Co-expression Network