Gene
RNA
| Item | Value |
|---|---|
| gene id | G205190 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 92962334 ~ 92962553 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU232211 | True | 220 | lncRNA | 0.37 | 1 | 92962334 | 92962553 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533914 | LOC106561638 | coding | upstream | 116528 | 92841792 ~ 92845806 (+) |
| LOC110499942 | LOC106561637 | coding | upstream | 122894 | 92837196 ~ 92839440 (+) |
| LOC110499936 | LOC106561616 | coding | upstream | 162350 | 92696182 ~ 92799984 (+) |
| LOC118943605 | NA | coding | upstream | 292590 | 92664825 ~ 92669744 (+) |
| LOC118943603 | NA | coding | upstream | 319005 | 92642030 ~ 92643329 (+) |
| trnap-ugg-3 | NA | coding | downstream | 72437 | 93034990 ~ 93035061 (+) |
| trnap-agg-3 | NA | coding | downstream | 75613 | 93038166 ~ 93038237 (+) |
| trnap-ugg-4 | NA | coding | downstream | 78164 | 93040717 ~ 93040788 (+) |
| trnap-ugg-5 | NA | coding | downstream | 87763 | 93050316 ~ 93050387 (+) |
| trnap-agg-4 | NA | coding | downstream | 90981 | 93053534 ~ 93053605 (+) |
| G205187 | NA | non-coding | upstream | 1774 | 92960265 ~ 92960560 (+) |
| G205175 | NA | non-coding | upstream | 9514 | 92952614 ~ 92952820 (+) |
| G205174 | NA | non-coding | upstream | 9782 | 92951981 ~ 92952552 (+) |
| G205132 | NA | non-coding | upstream | 39784 | 92922340 ~ 92922550 (+) |
| G205070 | NA | non-coding | upstream | 50183 | 92911399 ~ 92912151 (+) |
| G205207 | NA | non-coding | downstream | 12430 | 92974983 ~ 92975264 (+) |
| G205208 | NA | non-coding | downstream | 12989 | 92975542 ~ 92975844 (+) |
| G205248 | NA | non-coding | downstream | 47044 | 93009597 ~ 93009826 (+) |
| G205250 | NA | non-coding | downstream | 55165 | 93017718 ~ 93018104 (+) |
| G205255 | NA | non-coding | downstream | 66354 | 93028907 ~ 93029108 (+) |
| G204593 | NA | other | upstream | 279979 | 92681346 ~ 92682355 (+) |
| G204240 | ckap5 | other | upstream | 802431 | 92157275 ~ 92159903 (+) |
| G203646 | cpa2 | other | upstream | 937592 | 92021755 ~ 92024742 (+) |
| G203551 | NA | other | upstream | 1114934 | 91826849 ~ 91847400 (+) |
| G205404 | NA | other | downstream | 408840 | 93371393 ~ 93388550 (+) |
| G205482 | NA | other | downstream | 439064 | 93401617 ~ 93402234 (+) |
| G205683 | LOC106573085 | other | downstream | 833529 | 93796082 ~ 93798936 (+) |
| G205688 | NA | other | downstream | 847807 | 93810360 ~ 93812169 (+) |
| G206285 | NA | other | downstream | 977933 | 93940486 ~ 93941471 (+) |
