G206605


Basic Information

Item Value
gene id G206605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94098236 ~ 94100426 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU233830
CAACActtggaggggagggggagagagggaggtctgGCAACATCACCAACATAATGTTGCTTATTATCATACTCTGTAAGCCAGAGTAGATAACTTACCAATAGCCCACTAATATATCTATATAAGgctctggttagaagtagtgcattatgtaggagatgaggtgccatttggaacataacTGTGGACTGACTGTTCTCCAATGAAGCACTTTTTCACCTTTCTAAAAAGATCACAACCATGTATATCCTGACACTGTATAAGAGATATATCTGGGATATATTTTGGATTTAAATCGTTTTTAGTTTGTTTTAACTTTGACTTGAACCGAATCTGCCACCAATAACTGATTTTTAAAGGTTAGGACCATAAACAAACATAtaccattttttttgggggggggggggggggggggggataaccaTCTTGTCATGTTCAGTGGTTGGTTATCAATGTTTTACTTGAATGTATGCCTCAGAGATAGAATAATGGCTGGTCACTTGACATTTCTGTTTCTTGTACTTTTTAACACCAATGCAGCTAGTGGTCTTTCATTTGATTGTTTTAATGGTGACGGTGATATTGGTACATTCATCAGGGTGCAGATTTTTTtgacatatactgtataaatCGTTCAAAAAAATGTACCAATGTATTTAGAGGAAGATGTTAGCCACTGACCTGGTTAGTTCACACATACAGCTGCTTTAGATCACAGAGTAGAGTCCTAATCAGGATCCATGGCTGTAAGATGCTAAATGTTCACTCCTCACTAGTTTGATTTTAAGAATGCGTTACAGAACAATGACTTGACTGTTGTATTACTATTGTGAAATTGTAGCTATAGTTTGAAATGCATTAATATTTAAAATGCTCCTGAATGAAGTCTTCTGCCTCTGTATTATTTACTTTTAAATACATGCTGATTTTATTTTTTAGCTTAGAGTAATTTTTATCCTTCTCTAATTTATTTGCATGAGCGATGCTGATGTTCTGCATCCACTAATAACAGGTTGTGAACACTTTCCTTTCTCCAATATGCTGTTTTCCAGACATGGGTTCAAGTACTATTTAAAACACTTGATCGGGATCTTCAGCACATACGAATTCAGGACATATTTTACGAATTGGCTTTCGTTACATATTCTACGAAACGGGTGCCGTTGTTGTACACACGAGcgctactttcaaaactactggctgaaattacaCAAAACCTTTTGTATAACGCATTTTTTTAAAGCTGTGCTTGATTCAGCTTGCATGGCATAATAGAACCAATAGGATAGTCCCAAAATGGCAAGCCCCGCCCACCCGCACTCCAGGAAGGCTAAAGCAAATGCTCACCGTATTTGAAAGATTTCCAATAgtaattgaacccaggtctgttatCTCCATCCTAGCTACCCTGAAGTGCTGGTTCTCCTGTGCTATGCTATagtctaccatgttgtgttattATTACTGCTAGTTTGAATCATGCCGGTGTAGCAGAGGGACTGTATTCTATTATCGGCTGCTGCTTACTGCACTGATACTGTTGCTCGGGAACTGTCACAGTAGTGCCTGTGGCAAGTGAACGATGATGACATAGCTTAAAGATCTTACACAGCATAGACTCATTTCAACTGTCAAACCCGAGTCCCGTATTCATCAAGCATCTCAGATTaggagtgctggtctaggatcaggtcctctctCCAGATAATCTAATTAATTACGGTCAAAAAAGTCAAACGCTGATCAGTAGTCTATAGTTCCCTACCAAGCAAGAAGGCAGTAAATTAGTTTGTCATTTTTGCTATGTTAAATACGTGCTTAATgatgtggacaagtatcctgtctctgtgttttggaGGAAATGGgggggtcatgttagcagtaacttcataaagttactgtgaaaccaaggtaaattcAAGCTGTTTTTCTCAGTTCCAcgctatgagcagttactgccttttttgcttggtagggcagtatgcTACTCTGAGATGTTTTAAATAGGGTCCCAGGTTGATGACTGTGTAGTCAGGATGATGTCTTCGGTCCCTCCGGAGTGATGAAGACCAAGATGGACAGAGATATTGACTTGATTTGTTTTAAATACCGTTCTCCTATTGATCCCAtgtaagcagtgtgtgtgttgaacATGTATATTGTGTAATTAAAATGCATCACTGAAACACTC
>TU233831
GGTCACTTGACATTTCTGTTTCTTGTACTTTTTAACACCAATGCAGCTAGTGGTCTTTCATTTGATTGTTTTAATGGTGACGGTGATATTGGTACATTCATCAGGGTGCAGATTTTTTtgacatatactgtataaatCGTTCAAAAAAATGTACCAATGTATTTAGAGGAAGATGTTAGCCACTGACCTGGTTAGTTCACACATACAGCTGCTTTAGATCACAGAGTAGAGTCCTAATCAGGATCCATGGCTGTAAGATGCTAAATGTTCACTCCTCACTAGTTTGATTTTAAGAATGCGTTACAGAACAATGACTTGACTGTTGTATTACTATTGTGAAATTGTAGCTATAGTTTGAAATGCATTAATATTTAAAATGCTCCTGAATGAAGTCTTCTGCCTCTGTATTATTTACTTTTAAATACATGCTGATTTTATTTTTTAGCTTAGAGTAATTTTTATCCTTCTCTAATTTATTTGCATGAGCGATGCTGATGTTCTGCATCCACTAATAACAGGTTGTGAACACTTTCCTTTCTCCAATATGCTGTTTTCCAGACATGGGTTCAAGTACTATTTAAAACACTTGATCGGGATCTTCAGCACATACGAATTCAGGACATATTTTACGAATTGGCTTTCGTTACATATTCTACGAAACGGGTGCCGTTGTTGTACACACGAGcgctactttcaaaactactggctgaaattacaCAAAACCTTTTGTATAACGCATTTTTTTAAAGCTGTGCTTGATTCAGCTTGCATGGCATAATAGAACCAATAGGATAGTCCCAAAATGGCAAGCCCCGCCCACCCGCACTCCAGGAAGGCTAAAGCAAATGCTCACCGTATTTGAAAGATTTCCAATAgtaattgaacccaggtctgttatCTCCATCCTAGCTACCCTGAAGTGCTGGTTCTCCTGTGCTATGCTATagtctaccatgttgtgttattATTACTGCTAGTTTGAATCATGCCGGTGTAGCAGAGGGACTGTATTCTATTATCGGCTGCTGCTTACTGCACTGATACTGTTGCTCGGGAACTGTCACAGTAGTGCCTGTGGCAAGTGAACGATGATGACATAGCTTAAAGATCTTACACAGCATAGACTCATTTCAACTGTCAAACCCGAGTCCCGTATTCATCAAGCATCTCAGATTaggagtgctggtctaggatcaggtcctctctCCAGATAATCTAATTAATTACGGTCAAAAAAGTCAAACGCTGATCAGTAGTCTATAGTTCCCTACCAAGCAAGAAGGCAGTAAATTAGTTTGTCATTTTTGCTATGTTAAATACGTGCTTAATgatgtggacaagtatcctgtctctgtgttttggaGGAAATGGgggggtcatgttagcagtaacttcataaagttactgtgaaaccaaggtaaattcAAGCTGTTTTTCTCAGTTCCAcgctatgagcagttactgccttttttgcttggtagggcagtatgcTACTCTGAGATGTTTTAAATAGGGTCCCAGGTTGATGACTGTGTAGTCAGGATGATGTCTTCGGTCCCTCCGGAGTGATGAAGACCAAGATGGACAGAGATATTGACTTGATTTGTTTTAAATACCGTTCTCCTATTGATCCCAtgtaagcagtgtgtgtgttgaacATGTATATTGTGTAATTAAAATGCATCACTGAAACACTC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU233830 False 2191 lncRNA 0.39 1 94098236 94100426
TU233831 True 1697 lncRNA 0.39 1 94098236 94099932

Neighbor

gene id symbol gene type direction distance location
LOC110499999 LOC106561640 coding downstream 12323 93934415 ~ 94085913 (-)
LOC118943611 NA coding downstream 157862 93937585 ~ 93940374 (-)
LOC110502409 LOC106561641 coding downstream 173068 93759643 ~ 93925168 (-)
LOC110499989 LOC106573087 coding downstream 491331 93477061 ~ 93606905 (-)
LOC110499982 LOC106561633 coding downstream 725284 93337897 ~ 93372952 (-)
LOC110500006 LOC106561642 coding upstream 522 94100948 ~ 94141288 (-)
LOC110500013 LOC106561647 coding upstream 71455 94171881 ~ 94180442 (-)
LOC110500043 LOC106561646 coding upstream 83773 94184199 ~ 94221146 (-)
LOC110500065 LOC106561650 coding upstream 121940 94222366 ~ 94229545 (-)
LOC110500060 tnni3 coding upstream 132308 94232734 ~ 94243566 (-)
G206645 NA non-coding downstream 9559 94088340 ~ 94088677 (-)
G206564 LOC106561640 non-coding downstream 12345 93934420 ~ 94085891 (-)
G206619 NA non-coding downstream 58713 94039060 ~ 94039523 (-)
G206565 NA non-coding downstream 156747 93940477 ~ 93941489 (-)
G206563 NA non-coding downstream 165458 93932287 ~ 93932778 (-)
G206669 NA non-coding upstream 32423 94132849 ~ 94134411 (-)
G206672 NA non-coding upstream 42318 94142744 ~ 94143233 (-)
G206673 NA non-coding upstream 42991 94143417 ~ 94143763 (-)
G206674 NA non-coding upstream 44030 94144456 ~ 94144779 (-)
G205192 NA other downstream 1135302 92962044 ~ 92962934 (-)
LOC110499897 LOC106573100 other downstream 1658635 92398054 ~ 92443838 (-)
G204024 NA other downstream 2310133 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 2507187 91589212 ~ 91591049 (-)
G202279 NA other downstream 3656811 90377557 ~ 90441425 (-)
G206742 LOC106561643 other upstream 211998 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 212964 94313390 ~ 94313918 (-)
G206750 NA other upstream 227484 94327910 ~ 94328183 (-)
G207244 LOC100194703 other upstream 516489 94616915 ~ 94617232 (-)
G207249 NA other upstream 529011 94629437 ~ 94629739 (-)

Expression


Co-expression Network