G207524


Basic Information

Item Value
gene id G207524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95154198 ~ 95200654 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU234898
actctaaggtctacctacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattctgcatttcactgtaaggtctactacacctgttgtattctgcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcggcatttcactaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactaaggtctactacacctgttgtattcagcatttcactaaggtctactacacctgttgtattcagcatttcactaaggtctactacacctgtggtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgctgtattcagcaagcatttcactgtaaggcctactacacctgttgtattcagcatttcacattaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaagatctactacacctgttgtattcagcgcacgtgacaaataaacgttgatttgatcaACCACCAACCTATGAAAGGTGTGCTGCTgagacagaaccagtcagtaccagTCTGTCTCCCCAGGCAACAAGAAGAATGAATACCTCTCAGTGCTAATgagacagaaccagtcagtaccagTCTGTCTCCCCAGGCAACAAGAAGAATGAATACCTCTCAGTGCTAATgagacagaaccagtcagtaccagTCTGTCTCCCCAGGCAACAAGAAGAATGAATACCTCTCAGTGCTAATgagacagaaccagtcagtaccagTCTGTCTCCCCAGGCAACAAGAAGAATGAATACCTCTCAGTGCTAATGAGACAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234898 True 948 lncRNA 0.32 2 95154198 95200654

Neighbor

gene id symbol gene type direction distance location
LOC110502417 LOC106561684 coding downstream 29651 95097379 ~ 95124547 (-)
LOC110500368 LOC105021811 coding downstream 133769 95015675 ~ 95020429 (-)
trnay-gua NA coding downstream 144507 95009602 ~ 95009691 (-)
LOC110500345 LOC106561680 coding downstream 179285 94959918 ~ 94974913 (-)
LOC110500320 LOC106604557 coding downstream 372830 94777558 ~ 94781368 (-)
LOC118944198 NA coding upstream 70439 95271093 ~ 95271272 (-)
parietopsin LOC106561711 coding upstream 427795 95628449 ~ 95632062 (-)
LOC110502485 LOC106561707 coding upstream 435242 95635896 ~ 95664503 (-)
LOC110500466 nampt coding upstream 502705 95703359 ~ 95721115 (-)
LOC110533932 NA coding upstream 681477 95882131 ~ 95883679 (-)
G207519 NA non-coding downstream 6322 95147490 ~ 95147876 (-)
G207517 NA non-coding downstream 11383 95141941 ~ 95142815 (-)
G207503 NA non-coding downstream 34164 95119255 ~ 95120034 (-)
G207499 NA non-coding downstream 40684 95112765 ~ 95113514 (-)
G207278 NA non-coding downstream 58312 95095223 ~ 95095886 (-)
G207575 NA non-coding upstream 39869 95240523 ~ 95240886 (-)
G207589 LOC106561689 non-coding upstream 58484 95259138 ~ 95261093 (-)
G207592 NA non-coding upstream 66868 95267522 ~ 95267990 (-)
G207593 NA non-coding upstream 67652 95268306 ~ 95279187 (-)
G207836 NA non-coding upstream 95920 95296574 ~ 95296959 (-)
G207340 LOC105021815 other downstream 377842 94762662 ~ 94776356 (-)
G207249 NA other downstream 524459 94629437 ~ 94629739 (-)
G207244 LOC100194703 other downstream 536966 94616915 ~ 94617232 (-)
G206750 NA other downstream 826015 94327910 ~ 94328183 (-)
G206744 LOC106561643 other downstream 840280 94313390 ~ 94313918 (-)
G207858 LOC106561692 other upstream 177069 95377723 ~ 95408714 (-)
G207959 NA other upstream 323314 95523968 ~ 95524227 (-)
G207884 NA other upstream 403574 95604228 ~ 95609786 (-)
G207876 LOC106561706 other upstream 481383 95680851 ~ 95686864 (-)
G208077 NA other upstream 628720 95829374 ~ 95832362 (-)

Expression


Co-expression Network