G207884


Basic Information

Item Value
gene id G207884
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95604228 ~ 95609786 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235358
TCAAGTGTTTTATTAGTAGAACAGCTATGTATTTACAGTATTGATGTATTCTATCCACTGCACCAAAATCCACCATTTGGGATTTTCTTTTGTAGCTTCTTCCCCTTATAATCTGTATATTTTGTCCATAACAGGATCTATCTATAATTCATTAAAATCATCATTCTTATCATGTACCATTTTTTCGATATCTTCCCCGGGACACTCACTCATGTTGTCATTCACAAACCTTGGATACATCCTAATTGAATACAACTGAATTATGCAATGACCGCATGCAAAGTCCATTTATCAACAGATAGAAATATTATGAGTTGTTAACGCTTCACTTTAAGTTGGCCTTAATACACTGAacggacaaaacattaggaacacctgctctctccatgacatagactgaccaggtcaaTCCaagtgaaagttatgatccctctttgatgtcaccttttaaatccacttcaatccgtataaatgaaggggaggagacaggttacagaacggtccaccacccaaaggacatccagccaacctgacacaaccgtgggaagcattagagtcaacgtGAGCCAGCGTCCTcatggaacgctttcgacagcTTGTAGACTCCAAGCCCCGACGAATTGCCAAAAGGAGGCACAACtcaattaggaaggtgttcctaatgttttgtacacccggTGGACATATGTAACTGCAGTAAAACAGCATTGTAGTTACATAAATGATGGTCACGTATTAATTAAGGTGAAGTGTTACCTATGTGTTACAACTGCTATCTAAACCTAGAAATCAGAGGAATTATGCTATAACGGTGTTTTGTGAAGACAAAACAGAGAAATATTTACAACATTTACTAACAATGTACAGCATCATTTATTATTTTAACACAGTGACTTTAGTACCAAGGTCTTGCTTGCTTTTGATAAATGCAACCAAAAGAGGGATATGGCTTTTTGTTTACCCATATACCTCATTTCAAAGGTATTGATACAAGCAACTTTAATACGAATGTCTGGAGCTTCAGACAAAGGCTTAGGATAAGATAACAGTAGTGTCTCTCCAGGTTTAGATTGACAGATCTACATGGCTTCTAGAGGTGGCAGTGCTTTACTAGTTGTGATAACTTCCTTATATTATACAACTTTATTTCTACCTGGTAATAGCTAACATCTATTTTTCTAAtttcaattcaacttcaatttCAGTTTGAGGTCAATGTAATTCGGAGAAATGTATGTTACGTCATGTTCCTATCAGTAAGTCAGGCATAAAGCCTAAGATAAAAAAACAGATTGCGAATGCCAGGGGGCCTGTATTCATATAACACATCTCAgagttgatctaggatcaggtcctagTTAGCTCGGGCCCTGAATTAGGACTCTTACTTTGAACATTTTAACCGTTTCAGGATAGGGAAAGGTCTATACTCATAGAGTAAAGACATTAATCCAATAGGAAATGAATATTCACAGTGACTAAGTGGCACTTCATTCCAAATAACACACGTGTAAGTTACATATCGGCTGAATTAATTTACAGGAGTAAAGGGGAAGATCGGTTCAATCAAGGAGGAAAATGTCCCTTGGTTTAACAAAGGGCTCCCAGGTCCGGCAGTTTGATATGAGCGGAGAGAGAAAGCCGGACTGTCCCatacataataataatagacAGATCTGAGGATTGACCTTCATATGAGTACTTGAATGCATGTGTGCTTTGTCTTGAGTCTCTTCACTTCATCAAGAAACAGGAATTTGACGTTCAACTGCAAACGACACAGTTCTCCTCTCTTTTTCCACCTTGAGTCACAAGAGACGACATTTTGaacctttcctgcagtcaaatgaccaaatcgccctctagtggcctcatgggtggaatatcattaacatttttttttgttacaatttcattaaaaaaaaaaaaatctttaaaaaaaaaaatctggtgtttctgtgTCAAACATcgttttgttatatttcattcTTCTGTgttgcaaactcaaaatgtaatacatttgaaaTCTATACCTGACATGGTACAAGTGTCTTCTTTCTTTTAagacccataaccatgtgtgtgagatgttcacttttgtttcaaagtagatttgtttaagactaccaagaaacaatatgtgaccctgatttagtccACTTCCGTACAATTATTTATTAATAGTCCTCCAACAATGTATCTCAGTGTTTTTTTTTCAGGCATCAACGATCCAGCGATTCAATAGTTTGTTGCTTGAGCCTCCTGTGCTTAAAGGAAGGAGATGTACTTCAGGGCTTCCTGAATGTACTTCCTCTTTGTTCCATAGATGGATGATCTATCATTGGTCCCCATTGAGCAAAAGGCTTTTAGCTAGATCAAGTCCCTTAGCTCCAAGGTAGCCAGCCAATCACAGCAGTTTAATCCCATGCAGAGTCCAGTGGTAGTCCATATCAGGACAGAGAGCTATTCAAACCATGACGTCTGACCAAGGCCGGCACCAGGCATAAGAGACATACAGGTGAAGtgggaagttgacatacaccttagccaaatacttttaaactcagtttgtcacaattcctgacatttaatcctagtaaatattgcctgttttaggtcagttaggattaccactttattttaagaatgtgaaatgtcagaataatagtagagagaatgatttatttcagcttttatttatttcatcacattcccagtgtggcagaagtttacatacattcaattcgtatttggtagcattgcctttaaattgtttaccttgggtcaaatgtttcgggtagccttccacaagcttcccacaataaattgggtgaattttggcccattcctcctgacagagctggtgtaactgagtcaggtttgtaggcctccttgctcgcacatgctttttcagttctgcccacaaatttttcTAGAAgatagaggtcagggctttgtgatggccactccaatatcttgactttgttgtccttaagccataactttggaagtatgcttggggtcattgtccatttggaagacccatttgcaaccaagctttaacttcctgactgatgtcttcagatgttgcttcaatatatccacataattgttcttcctcatgatgacatctattttgtgatgtgcaccagtccctcctgcaggaaagcacacccaacatgatgctgccacccctgtgtttcatggttggtatggtgttcttcggcttgcaagcctccccctttttcctccaaacataacaatggtcgttGTGGCCGAACAGGTCTATtactgtttcatcagaccagaggacatttctccaaaaagtatgatctttgtccccatgtgcagttgcaaaccgtagtctgactattttatggcggttttggagcagtggcttcttccttgctgagcggcctttcaggttatgtcgatattggactcgttttcctgtggatatagatacttttctacctgtttcctccagcatcttcacaagatcctttgccgttattctgggattgatttgcacttttcgcactaaagtacattcatcactaggagacagaacgcgtctccttcttgagcggtatgacggctgcgtggtcccatggtgttaatacttgcgtactattgtttgtacagatgaatgtggtaccttcaggcgtttggaaattgctcccaaggatgaaccagacttgtggaggtctccaattttttttctgaggtcttggctgatatcttttgatttttccatgatgtcaagcaaagaggcactgagttagaaggtaggccttgaaatatatccacttATATATATCTAgttatacctccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagccatgacataattttctgggattttccaagctgtttaaaggcacagtcaacttagtgtatgtaaacttctgacccactggaattgtgatacagttaacaagaaatgtgtggagtggttgaaaaacgagttttaatgactccaaccgaagtttatgtaaacttccgacttcaactgtatgtggccACTTAGGGCCCCAAACTGCTaagaactcagtcggggtctcaacttactgttgagttaGGATAacagaatacacaaggtgcaagttGGAAATGTGGTTTTGCATCAGCAatgtttctcttgttatgtctgTGACAGTCATGTCAACTAACAATGTTTAGATTAGTAAGTTCATTTAGCCAGCTACTGTAAAACTTCAATAAACGCAGAGTTTCAAATAACCGCCTGTCCCTTTTAAGAGCTGGGCAACTAACTGCACACCTTGCAGCAAATAAACACTTGTTTATAATAAATGCTGGGTCTAAATTAATTgtttaatgtttgatttgttaaattaTATAATTCAGTAATGACTCGAAAAAATGATGTCAATCATCCGTTTTTATCACCAGTAAGgaactgctagccattggctgaTAACAGCTGAGGACTGCTACCTTACTGGCAAGCATAAAAACAGTCAACAACGACCCCTAGAAATCGTCTGATCTAGTGGCGAAAGTAAGAACTACTGAAAACGCACAGTCAAAGAGGAGAGTAATTATCCTGTCAAGGAAaagtacaaaaatatatatattgaaaaaGAAAGTGTGTAAATTATAACACAGTAGAGCAGGAAATAAAGAAGTTGATTAAAATGATGGACGTGAATGCTGGAATTCAAAAATTATCTATGCAAAAAGCTGTGCGCATTAAGGAAATGGACGTCTCGGTCAAAGATaagcctgtctctaataagcacctgttgtgttcagtgatttaaGAAAATAAACGGCCAGGCTATTAATTGAAGTTTTACggtatctaaacttgtagtaatcatggccgaataccgaCCTGGAACGCAGGGCACGtgtccaggggccctgacctccaggggggcCCCAATTGATTTTGTTAGTTACTCACTCAGATATTATTGACattgtaaaatgtgtagaattgcaggaaattatgcGGGATTCTGGCAGGATGACTGTCCTCCAATCAGTCCAATCAATTAGTggtctcgatctctctctctctctctctctctctctctctctctctctgtgtctctttctctctctctctctctctctgtgtgtgtctctctctctctctctctgtctctctctctctctctctctctctctgtgtgtctctctctctctctctctctctctctgtctctctctctatctctctctctctctttctctctctctctcctgctgctgTTTCTCATTGAGACCAGTTAGCCAAACAGTTTTCCATGAAGTCAGCCAAACAGTCAGCCAAACAGTCAGCCAAACAGACCTTGACTGACAGTGGACATCTACAAGGCCGACACTCTGACAATGTTGCTCTGAGAATAATTGACGGTGGAGCTGGTGGATCCGTCACCGTCTGATGATGTCACCAATGGGAGAGGGGCGGGACGCAGGTTGACCACGGAGGTGGTGATGTAGGGCTCGCTCTTCAACGGCACCGTCTCAGAGTCTAGTTTGGCGTTCAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235358 True 5559 TUCP 0.40 1 95604228 95609786

Neighbor

gene id symbol gene type direction distance location
LOC118944198 NA coding downstream 332956 95271093 ~ 95271272 (-)
LOC110502417 LOC106561684 coding downstream 479681 95097379 ~ 95124547 (-)
LOC110500368 LOC105021811 coding downstream 583799 95015675 ~ 95020429 (-)
trnay-gua NA coding downstream 594537 95009602 ~ 95009691 (-)
LOC110500345 LOC106561680 coding downstream 629315 94959918 ~ 94974913 (-)
parietopsin LOC106561711 coding upstream 18663 95628449 ~ 95632062 (-)
LOC110502485 LOC106561707 coding upstream 26110 95635896 ~ 95664503 (-)
LOC110500466 nampt coding upstream 93573 95703359 ~ 95721115 (-)
LOC110533932 NA coding upstream 272345 95882131 ~ 95883679 (-)
LOC110502500 LOC106561698 coding upstream 441516 96051302 ~ 96092405 (-)
G208000 LOC106561712 non-coding downstream 329 95603454 ~ 95603899 (-)
G207997 NA non-coding downstream 2356 95601605 ~ 95601872 (-)
G207996 NA non-coding downstream 3523 95600375 ~ 95600705 (-)
G207995 NA non-coding downstream 4050 95599914 ~ 95600178 (-)
G207993 NA non-coding downstream 10585 95593419 ~ 95593643 (-)
G208003 NA non-coding upstream 6304 95616090 ~ 95616405 (-)
G208007 NA non-coding upstream 10895 95620681 ~ 95620903 (-)
G208010 NA non-coding upstream 14304 95624090 ~ 95625006 (-)
G207878 NA non-coding upstream 22511 95632297 ~ 95633415 (-)
G207959 NA other downstream 80001 95523968 ~ 95524227 (-)
G207858 LOC106561692 other downstream 195514 95377723 ~ 95408714 (-)
G207340 LOC105021815 other downstream 827872 94762662 ~ 94776356 (-)
G207249 NA other downstream 974489 94629437 ~ 94629739 (-)
G207244 LOC100194703 other downstream 986996 94616915 ~ 94617232 (-)
G207876 LOC106561706 other upstream 72251 95680851 ~ 95686864 (-)
G208077 NA other upstream 219588 95829374 ~ 95832362 (-)
G208472 NA other upstream 524291 96134077 ~ 96134472 (-)
G208658 NA other upstream 812080 96421866 ~ 96422224 (-)
G209560 NA other upstream 1807035 97416821 ~ 97417188 (-)

Expression


Co-expression Network