G207878


Basic Information

Item Value
gene id G207878
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95632297 ~ 95633415 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235352
ttgaaggtaggccttgaaatacatccacaggtacacctccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagccatgacatacttttctagaatgttccaagctgtttaaaggcacagtcaactctgtgtatgtaaacttctgacccactggaattgtgatacagtgaaataatctgtctgtaaacaattgttggaaaaattacttgtgtcatgcacaaagtagatttcctaacctacttgccaaatctatagtttgttaacaagaaatttgtggagtggttgaaaaacgagttttaatgactccaacctaagtgtatgtaaacttccgacttcaaccgtacatgaccctaagcatgatgggacgttaattgcttaattaactcaggaaccacaccggTGTGgtagcacctgctttcaatatactttgtatccctccaTTTCCTCCCGTGTTTCCATGGTTTCGGAAGTTACCTGTTTGTGTAAACAAAGGAACAGTTGGTTATAAGGGACTTTTAACCAATGGTGGTCTTTGAACCAATAAGAACAGAGAAAGACGAGATATAAACTAATGAGTTGAATATCTTGACAATTTGACATGTTCAAGACACACTCTGAAATGCCTTAAGCTTTTGCACACTATAACTGCCCTGTCGATCTCTCTGTCTTTAGAACAGGCTCTATTTACCCTAGTAATAATGTAGATACCCTAAAATCATACTTTCCACAAAGGCTTAATCATTATTATTAATAGTCTTTACTAGTTAAGGTGTCTATCAATGTGGTTAGTACAACGGATAGAACAGTCAGTTTACAACAGAatgttcttatttttttttatagaaaaGAGGACATATGCTGTATTTCATGGACAAATCTATTTATCATTGTGTCCAGTAATTTCTATGCTGTATTTGAGTTGCTTGGCTATatttttgtttgtctgtttgttttcatAAACattctgctttaaaaaaaaacaacaaccttgcTTTCAATCTAGATATAAAATTGTGTTTAAATCATTGACTTTGCACTGAAATGTTCAGAAATTAGTTGTATTAGTTTTGTGGGGGAAACTAACAAGAAAATAACTTCTGTTTCTTGT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU235352 True 1119 lncRNA 0.39 1 95632297 95633415

Neighbor

gene id symbol gene type direction distance location
parietopsin LOC106561711 coding downstream 325 95628449 ~ 95632062 (-)
LOC118944198 NA coding downstream 361025 95271093 ~ 95271272 (-)
LOC110502417 LOC106561684 coding downstream 507750 95097379 ~ 95124547 (-)
LOC110500368 LOC105021811 coding downstream 611868 95015675 ~ 95020429 (-)
trnay-gua NA coding downstream 622606 95009602 ~ 95009691 (-)
LOC110502485 LOC106561707 coding upstream 2481 95635896 ~ 95664503 (-)
LOC110500466 nampt coding upstream 69944 95703359 ~ 95721115 (-)
LOC110533932 NA coding upstream 248716 95882131 ~ 95883679 (-)
LOC110502500 LOC106561698 coding upstream 417887 96051302 ~ 96092405 (-)
LOC110502509 LOC106561697 coding upstream 496896 96129727 ~ 96370206 (-)
G208010 NA non-coding downstream 7291 95624090 ~ 95625006 (-)
G208007 NA non-coding downstream 11394 95620681 ~ 95620903 (-)
G208003 NA non-coding downstream 15892 95616090 ~ 95616405 (-)
G208000 LOC106561712 non-coding downstream 28398 95603454 ~ 95603899 (-)
G207885 NA non-coding upstream 662 95634077 ~ 95634352 (-)
G207880 NA non-coding upstream 1106 95634521 ~ 95635415 (-)
G208014 NA non-coding upstream 19843 95653258 ~ 95695097 (-)
G207876 LOC106561706 non-coding upstream 47436 95680851 ~ 95686864 (-)
G207883 NA non-coding upstream 64708 95698123 ~ 95702054 (-)
G207884 NA other downstream 22511 95604228 ~ 95609786 (-)
G207959 NA other downstream 108070 95523968 ~ 95524227 (-)
G207858 LOC106561692 other downstream 223583 95377723 ~ 95408714 (-)
G207340 LOC105021815 other downstream 855941 94762662 ~ 94776356 (-)
G207249 NA other downstream 1002558 94629437 ~ 94629739 (-)
G208077 NA other upstream 195959 95829374 ~ 95832362 (-)
G208472 NA other upstream 500662 96134077 ~ 96134472 (-)
G208658 NA other upstream 788451 96421866 ~ 96422224 (-)
G209560 NA other upstream 1783406 97416821 ~ 97417188 (-)

Expression


Co-expression Network