G207880


Basic Information

Item Value
gene id G207880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95634521 ~ 95635415 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235354
GGAAGGGGTTCATTGTGACACTCTGTCTTGACCTGCTCTGGACACAGAGCTCTCAAATACCTGTTTCACTCTATCATGCTGACCTGAAACATACATATCATGCTGACCTGAAACATACTGAAACATATGTAGACAAGCCAGCTGAGTAGAGTGAAAGGGGTAGAAGATGGCGTACAGGACTCTGCTGACTCTGACTTACTGTCTCTATTTTCCACTGATGTCATCTCCTGTTGACCTTACTCTATTTTCTACTGATGTCATCTCATGTTGACCTTACTCTATTTTCTACTGACTTCATCTCATGTTGACCTTACTCTATTTTCTACTGATGTCATCTCATGTTGACCTTACTctattttccaatgatgtcatcTCATGTTGACCTTACTCTATTTTCTACTGATGTCATCTCATGTTGACCTTACTctattttccaatgatgtcatcTCATGTTGACCTTACTCTATTTTCCACTGATGTCATATCATGTTGACCTTACGGCTGTCAGTAACTTCAATACTGACCTGCTCTGCTTTTATAATCTCGCTATTATATGTGTAGGTTGAATTTAAAACAGTAACTCTTAAATATTTCTGCCATATTTCTGTTTTAGGTTGAAAACTAGCGGTACGGTTAGCTTAGTACGCTATACCAAAACACTACACAATACGTTTGCTTGAATGTTCTTGACACACATACAGAATGGAAACAAATAACAATTTACTCAGATCTGAAAACTTGCATCCaaacaatatacagttgaagtcggaagtttacatacaccttagccaactacatttaaactcaacatttaatcctagtaacaattccctgtcttaggtcagttaggatcaccactttattttaagaatgtgaaatgtcagaacaatagtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU235354 True 895 lncRNA 0.37 1 95634521 95635415

Neighbor

gene id symbol gene type direction distance location
parietopsin LOC106561711 coding downstream 2549 95628449 ~ 95632062 (-)
LOC118944198 NA coding downstream 363249 95271093 ~ 95271272 (-)
LOC110502417 LOC106561684 coding downstream 509974 95097379 ~ 95124547 (-)
LOC110500368 LOC105021811 coding downstream 614092 95015675 ~ 95020429 (-)
trnay-gua NA coding downstream 624830 95009602 ~ 95009691 (-)
LOC110502485 LOC106561707 coding upstream 481 95635896 ~ 95664503 (-)
LOC110500466 nampt coding upstream 67944 95703359 ~ 95721115 (-)
LOC110533932 NA coding upstream 246716 95882131 ~ 95883679 (-)
LOC110502500 LOC106561698 coding upstream 415887 96051302 ~ 96092405 (-)
LOC110502509 LOC106561697 coding upstream 494896 96129727 ~ 96370206 (-)
G207885 NA non-coding downstream 169 95634077 ~ 95634352 (-)
G207878 NA non-coding downstream 1106 95632297 ~ 95633415 (-)
G208010 NA non-coding downstream 9515 95624090 ~ 95625006 (-)
G208007 NA non-coding downstream 13618 95620681 ~ 95620903 (-)
G208014 NA non-coding upstream 17843 95653258 ~ 95695097 (-)
G207876 LOC106561706 non-coding upstream 45436 95680851 ~ 95686864 (-)
G207883 NA non-coding upstream 62708 95698123 ~ 95702054 (-)
G208037 NA non-coding upstream 82067 95717482 ~ 95718864 (-)
G208045 NA non-coding upstream 95034 95730449 ~ 95730692 (-)
G207884 NA other downstream 24735 95604228 ~ 95609786 (-)
G207959 NA other downstream 110294 95523968 ~ 95524227 (-)
G207858 LOC106561692 other downstream 225807 95377723 ~ 95408714 (-)
G207340 LOC105021815 other downstream 858165 94762662 ~ 94776356 (-)
G207249 NA other downstream 1004782 94629437 ~ 94629739 (-)
G208077 NA other upstream 193959 95829374 ~ 95832362 (-)
G208472 NA other upstream 498662 96134077 ~ 96134472 (-)
G208658 NA other upstream 786451 96421866 ~ 96422224 (-)
G209560 NA other upstream 1781406 97416821 ~ 97417188 (-)

Expression


Co-expression Network