G207883


Basic Information

Item Value
gene id G207883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95698123 ~ 95702054 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235357
GTCTAGCAGCAGGAAGGGTAATGATGCCCCAACCTCGAATAGATTTTGCACTTGTTAATTAGAGAACCGATTGTCTTCATCAAATTCTTGGAATCTTTAGAATATTTTGTTATTATCGATCATATTGACTGAATAGCAAACCGAGTGTTTCACGTTTTGTCATCTGAATTTAAGTTTTAACCACGGCTTTCGCTTTTGGGAGCTGTAGTGGCTGACGTTactgtggaataaatattgtgtcCATTTCTTGCGGGGAGGAAACAAGATAAACTTTGATCGAAGcctctccgtgtgtgtgtgtgtctccttccTTCCATTCTGGCAGAACATTGTGGTGATCGTGCTCTTTGCCATCCTGTGGTTGAAGAGTGTGTCGTCATGGGCCAGGGGTCTACAGAGTGTACCCTGGCACAGTGCCGAGGACAGGGCATGGTCTCAACGTGTCTGTGatCTGTGGTTCCCTGAACGTGGTTCTGTGGGTGGGCAACACCTGGGTCCCCAATAAAGAGACCCCATGGCACGACAGAGACAGACTGCCCTGCACCAGAGCCTAGGGATTGAGCACAGGTCATATGGGGGGCCTTATATGAGCCCCCCTTCGCCATCCACTGATGCCCTCATCAGCAACAGTGCCCGCAGAGGAGAGGTGGTATGGAGCCCTTGCAGGgacaaacttttttttattttttacttcctCTGCGTTTCTCTTGTCACATTAACTTTTTGTTTTGTGTCTGTAAACAGTTATTATTCTATTACTGTATCTGTTTCCTTCAACCTTTAGCTTTTTAATCACAATGTTGCTTTCTGTCCGTCCACTGACATGTAATATGCTTTGGTCACTTGGAATCTTTGGTCACTTGGAATCTTTGGTCACTTGGAATATTCTTTCATGTACAATACTGAATGTATTAgatattattattgtatttgtATCTCTCTCAGGACAATCCCAGACAATGAATTGCCTTGATGAAGTCTGTGACGTCTTTGGTGTATTCTTGTGAATATTTAAGCTAATTGAGACTGGACCCCGATTCAATTCCTTTTTAGGCTATAATAGAGCCACATCAGGCTGGTTACAGTAGTAAGGAGACAGGCTGTGTGTTGAATTCAGTCAAATCACTTCTCTCAAACACATATGTTATAAATGCTCAATTTCAACACCCTATAAATTAAACCACGTTAACATGTTTTGCTCTGTCctctagcctggttccagatttGTTTGTGCTGTTTTATCAACTCATATGGTCCTTTACTGACAGCGCAAACAAATGTGGGGCCAGGCTATctcccctctaccacacacagcaaCCCAGTACTCAGTCACAGGGTGGTGGTTAAATTGCTTCAAAATCGTGATGTAt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235357 True 1370 lncRNA 0.40 3 95698123 95702054

Neighbor

gene id symbol gene type direction distance location
LOC110502485 LOC106561707 coding downstream 33620 95635896 ~ 95664503 (-)
parietopsin LOC106561711 coding downstream 66151 95628449 ~ 95632062 (-)
LOC118944198 NA coding downstream 426851 95271093 ~ 95271272 (-)
LOC110502417 LOC106561684 coding downstream 573576 95097379 ~ 95124547 (-)
LOC110500368 LOC105021811 coding downstream 677694 95015675 ~ 95020429 (-)
LOC110500466 nampt coding upstream 1305 95703359 ~ 95721115 (-)
LOC110533932 NA coding upstream 180077 95882131 ~ 95883679 (-)
LOC110502500 LOC106561698 coding upstream 349248 96051302 ~ 96092405 (-)
LOC110502509 LOC106561697 coding upstream 428257 96129727 ~ 96370206 (-)
LOC110500576 NA coding upstream 931787 96633841 ~ 96640404 (-)
G208014 NA non-coding downstream 3026 95653258 ~ 95695097 (-)
G207876 LOC106561706 non-coding downstream 11259 95680851 ~ 95686864 (-)
G207880 NA non-coding downstream 62708 95634521 ~ 95635415 (-)
G207885 NA non-coding downstream 63771 95634077 ~ 95634352 (-)
G207878 NA non-coding downstream 64708 95632297 ~ 95633415 (-)
G208037 NA non-coding upstream 15428 95717482 ~ 95718864 (-)
G208045 NA non-coding upstream 28395 95730449 ~ 95730692 (-)
G208046 NA non-coding upstream 29321 95731375 ~ 95731596 (-)
G208060 NA non-coding upstream 61740 95763794 ~ 95764050 (-)
G208065 NA non-coding upstream 66802 95768856 ~ 95769161 (-)
G207884 NA other downstream 88337 95604228 ~ 95609786 (-)
G207959 NA other downstream 173896 95523968 ~ 95524227 (-)
G207858 LOC106561692 other downstream 289409 95377723 ~ 95408714 (-)
G207340 LOC105021815 other downstream 921767 94762662 ~ 94776356 (-)
G208077 NA other upstream 127320 95829374 ~ 95832362 (-)
G208472 NA other upstream 432023 96134077 ~ 96134472 (-)
G208658 NA other upstream 719812 96421866 ~ 96422224 (-)
G209560 NA other upstream 1714767 97416821 ~ 97417188 (-)
G209802 NA other upstream 1799118 97501172 ~ 97502394 (-)

Expression


Co-expression Network