G208316


Basic Information

Item Value
gene id G208316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96011026 ~ 96013459 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235844
GCTACAGTTACCAAAAGCCATGCAATATCTACAGCTTTTATCTATGAACCCTCTAATGTACTTTGTTTTCAATAAATAGTACTAATTTATCCACCTCTGGTATTTGTACATTTACAGTAGatacacatacaggtaactgccaaaatgaaGGAACAACTTGaggaaatgagggatacaaataTATTGAAACCAGgttcttccacacaggtgtggttcctgattGAAATGCAGAGTTGACTGTTATTTCGGCCACCAGGGACGAAGAGAtctcagttagttagttagttagttagttagttagttagtctcACTTAGTGACTCTGAAagagaggggtctcaaaggagcataagGGATTtaaagggtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctcgtgttcACTTCAGTCCCCAGATTTCAACCCAACTGAACATTCTGGAGCGGCTCCTCATTTTCCACCCCCGTCAACAAGACACCGAACTATGGCATTTCTTGTGGAGGAACGGTGTTGCATCCTTCCAATGGAGTTTTAGACTCCTGTAGAATCGGTGCCAAggagcattgaagctgttctggctcgtggtgcccCAACAACCtattattaagacactttatgttggggtttcctttatcttggcagCTACCTGTATATTTACATTGCTGTTGTGGAATGTGTTTCCCTCGTTTTTATCCCAACCTGATGAAACCTAATAATTAGTCCTTTCTTAGAGTCAGTGGCGGCTGGTGTCAttttgtttgatgtgtttgatagctttccattttttttcaacgtcagccattacaatgaacctGTCCTCCAATTTCTCccaccaccagcctcctctgctttGAGTTTTAAAGATTGCACTCAAGGACAAAACAGACCGTGCCGATGAATGGCTGAAAGCAGCGTTTGGCCTTCCTTTCTCCTCTGACAACAGAACGTCAGCCCTCGTTTTCAGTTTTCCGACAATCCTACATGTTGAATCACCACCATCCGTTCGACACCCTTCAGGTGATCTGTTGCACACTGTCAACGTTCCTTATTGTGTTGTCTTGCCCTAAAGTAGTTCATTCATTCAACAGAAAGAGAATGACTAGAATTCATTCAACAGATATAGAATGACTAGATTCTAGGATTTCATTCCACAGGATCCTCTGAAGACATTTCTGTCTGGTCTCGTTGTCCGGGACTTAAACCtgggtccagcgactgtcaacCCAACACCTTAGCCATTACACCAAGAGATCCCGTTTTTTTTTCCTGGATCAAAACGGGACTTAGGTGATGGGCATGCATGGTGGGGGGGGCATGTCCATTTTATGCATTTTGACAGAGATAAAATgtaatttcttgcaattctacacattctgcCTTGGTTTATGCTATCTGAGGGACTCGAACGTCATAACAAATAAATGGGGGCCTCATGCCATGACAAAAATACTCCTGAATGCATCATTTTTTGGAACTTTaaattctccctgactgtctagcttttatttcgGTGTTTGTTAGTTGTCAAATAAAATcttagttaaaaaatatataggtgTATTATCTTTTcaacatactttatatctggttaAAGCTattttaagtttacactgaaaacgtTTTCACATCCCGAAAATGATTGGACATAGGCGGTCTGAAAAGAAAATGATGCGGCCCGCCCAAGACTTTCCTCTGCAGACAAAACCCTGAGATCCGGACCTCTGGACAAGGTCTCTAAGTATTCACTGTCATTCCACAGCATCCTCTGAAGACTGCAGACATTTTTGCCTGGCCTCGGCATCCTCGTTGATGGTGACCTTCTTGTTCCTTTTGGGGTCAATCCAGGAGTTACGTATGACCGCGTTGTTGGGCAGCGGGTCAGCCTCTATGATGCTCAC
>TU235845
GTAACGTAATAAAATATGCactaagtcaaggggtctgaatactttctgaacgcagAAAGTATTGGCATTTTGTGATGTTTGCTGTTGTCTTGTACACAGGCCTCACTTGTCAAAGAGATCTCATTCTCTGCTTCCCTAATTAATGATGGATTTACTGTATACAAATGAAAACATCCCCAGATTTCAACCCAACTGAACATTCTGGAGCGGCTCCTCATTTTCCACCCCCGTCAACAAGACACCGAACTATGGCATTTCTTGTGGAGGAACGGTGTTGCATCCTTCCAATGGAGTTTTAGACTCCTGTAGAATCGGTGCCAAggagcattgaagctgttctggctcgtggtgcccCAACAACCtattattaagacactttatgttggggtttcctttatcttggcagCTACCTGTATATTTACATTGCTGTTGTGGAATGTGTTTCCCTCGTTTTTATCCCAACCTGATGAAACCTAATAATTAGTCCTTTCTTAGAGTCAGTGGCGGCTGGTGTCAttttgtttgatgtgtttgatagctttccattttttttcaacgtcagccattacaatgaacctGTCCTCCAATTTCTCccaccaccagcctcctctgctttGAGTTTTAAAGATTGCACTCAAGGACAAAACAGACCGTGCCGATGAATGGCTGAAAGCAGCGTTTGGCCTTCCTTTCTCCTCTGACAACAGAACGTCAGCCCTCGTTTTCAGTTTTCCGACAATCCTACATGTTGAATCACCACCATCCGTTCGACACCCTTCAGGTGATCTGTTGCACACTGTCAACGTTCCTTATTGTGTTGTCTTGCCCTAAAGTAGTTCATTCATTCAACAGAAAGAGAATGACTAGAATTCATTCAACAGATATAGAATGACTAGATTCTAGGATTTCATTCCACAGGATCCTCTGAAGACATTTCTGTCTGGTCTCGTTGTCCGGGACTTAAACCtgggtccagcgactgtcaacCCAACACCTTAGCCATTACACCAAGAGATCCCGTTTTTTTTTCCTGGATCAAAACGGGACTTAGGTGATGGGCATGCATGGTGGGGGGGGCATGTCCATTTTATGCATTTTGACAGAGATAAAATgtaatttcttgcaattctacacattctgcCTTGGTTTATGCTATCTGAGGGACTCGAACGTCATAACAAATAAATGGGGGCCTCATGCCATGACAAAAATACTCCTGAATGCATCATTTTTTGGAACTTTaaattctccctgactgtctagcttttatttcgGTGTTTGTTAGTTGTCAAATAAAATcttagttaaaaaatatataggtgTATTATCTTTTcaacatactttatatctggttaAAGCTattttaagtttacactgaaaacgtTTTCACATCCCGAAAATGATTGGACATAGGCGGTCTGAAAAGAAAATGATGCGGCCCGCCCAAGACTTTCCTCTGCAGACAAAACCCTGAGATCCGGACCTCTGGACAAGGTCTCTAAGTATTCACTGTCATTCCACAGCATCCTCTGAAGACTGCAGACATTTTTGCCTGGCCTCGGCATCCTCGTTGATGGTGACCTTCTTGTTCCTTTTGGGGTCAATCCAGGAGTTACGTATGACCGCGTTGTTGGGCAGCGGGTCAGCCTCTATGATGCTCAC

Function

NR:

description
probable G-protein coupled receptor 22

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235844 False 1906 lncRNA 0.43 2 96011026 96012981
TU235845 True 1662 lncRNA 0.43 2 96011026 96013459

Neighbor

gene id symbol gene type direction distance location
LOC110533932 NA coding downstream 127347 95882131 ~ 95883679 (-)
LOC110500466 nampt coding downstream 289911 95703359 ~ 95721115 (-)
LOC110502485 LOC106561707 coding downstream 346523 95635896 ~ 95664503 (-)
parietopsin LOC106561711 coding downstream 379054 95628449 ~ 95632062 (-)
LOC118944198 NA coding downstream 739754 95271093 ~ 95271272 (-)
LOC110502500 LOC106561698 coding upstream 37843 96051302 ~ 96092405 (-)
LOC110502509 LOC106561697 coding upstream 116852 96129727 ~ 96370206 (-)
LOC110500576 NA coding upstream 620382 96633841 ~ 96640404 (-)
LOC110500541 LOC106561741 coding upstream 633671 96647130 ~ 96897073 (-)
pik3c2g LOC106561742 coding upstream 1006132 97019591 ~ 97077900 (-)
G208306 NA non-coding downstream 8198 96000916 ~ 96002828 (-)
G208226 NA non-coding downstream 37879 95972833 ~ 95973147 (-)
G208215 NA non-coding downstream 49985 95960829 ~ 95961041 (-)
G208170 NA non-coding downstream 111995 95871820 ~ 95899031 (-)
G208168 NA non-coding downstream 140811 95869578 ~ 95870215 (-)
G208319 NA non-coding upstream 11467 96024926 ~ 96026020 (-)
G208320 NA non-coding upstream 13587 96027046 ~ 96027340 (-)
G208308 NA non-coding upstream 35957 96049416 ~ 96049839 (-)
G208341 NA non-coding upstream 55372 96068831 ~ 96115749 (-)
G208361 NA non-coding upstream 96537 96109996 ~ 96117440 (-)
G208077 NA other downstream 178664 95829374 ~ 95832362 (-)
G207876 LOC106561706 other downstream 324162 95680851 ~ 95686864 (-)
G207884 NA other downstream 401240 95604228 ~ 95609786 (-)
G207959 NA other downstream 486799 95523968 ~ 95524227 (-)
G207858 LOC106561692 other downstream 602312 95377723 ~ 95408714 (-)
G208472 NA other upstream 120618 96134077 ~ 96134472 (-)
G208658 NA other upstream 408407 96421866 ~ 96422224 (-)
G209560 NA other upstream 1403362 97416821 ~ 97417188 (-)
G209802 NA other upstream 1487713 97501172 ~ 97502394 (-)
G209841 NA other upstream 1605400 97618859 ~ 97619212 (-)

Expression


Co-expression Network