G208319


Basic Information

Item Value
gene id G208319
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96024926 ~ 96026020 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235848
gtcctgtatttggctccatccatcttcctatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaacagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatgtctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggatggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggcttaaaCTTCTTCagaacagtatctcggacctgcctggtgtgttccttgttcttcgtgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattgtatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgtccaatttttcagttttggatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacattctgCTAGACAAATCTACATTCTCCTGAGCTCTCTGTGTCCTTCACA

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235848 True 1095 lncRNA 0.42 1 96024926 96026020

Neighbor

gene id symbol gene type direction distance location
LOC110533932 NA coding downstream 141247 95882131 ~ 95883679 (-)
LOC110500466 nampt coding downstream 303811 95703359 ~ 95721115 (-)
LOC110502485 LOC106561707 coding downstream 360423 95635896 ~ 95664503 (-)
parietopsin LOC106561711 coding downstream 392954 95628449 ~ 95632062 (-)
LOC118944198 NA coding downstream 753654 95271093 ~ 95271272 (-)
LOC110502500 LOC106561698 coding upstream 25282 96051302 ~ 96092405 (-)
LOC110502509 LOC106561697 coding upstream 104291 96129727 ~ 96370206 (-)
LOC110500576 NA coding upstream 607821 96633841 ~ 96640404 (-)
LOC110500541 LOC106561741 coding upstream 621110 96647130 ~ 96897073 (-)
pik3c2g LOC106561742 coding upstream 993571 97019591 ~ 97077900 (-)
G208316 NA non-coding downstream 11467 96011026 ~ 96013459 (-)
G208306 NA non-coding downstream 22098 96000916 ~ 96002828 (-)
G208226 NA non-coding downstream 51779 95972833 ~ 95973147 (-)
G208215 NA non-coding downstream 63885 95960829 ~ 95961041 (-)
G208170 NA non-coding downstream 125895 95871820 ~ 95899031 (-)
G208320 NA non-coding upstream 1026 96027046 ~ 96027340 (-)
G208308 NA non-coding upstream 23396 96049416 ~ 96049839 (-)
G208341 NA non-coding upstream 42811 96068831 ~ 96115749 (-)
G208361 NA non-coding upstream 83976 96109996 ~ 96117440 (-)
G208368 NA non-coding upstream 97022 96123042 ~ 96124588 (-)
G208077 NA other downstream 192564 95829374 ~ 95832362 (-)
G207876 LOC106561706 other downstream 338062 95680851 ~ 95686864 (-)
G207884 NA other downstream 415140 95604228 ~ 95609786 (-)
G207959 NA other downstream 500699 95523968 ~ 95524227 (-)
G207858 LOC106561692 other downstream 616212 95377723 ~ 95408714 (-)
G208472 NA other upstream 108057 96134077 ~ 96134472 (-)
G208658 NA other upstream 395846 96421866 ~ 96422224 (-)
G209560 NA other upstream 1390801 97416821 ~ 97417188 (-)
G209802 NA other upstream 1475152 97501172 ~ 97502394 (-)
G209841 NA other upstream 1592839 97618859 ~ 97619212 (-)

Expression


Co-expression Network