G210188



Basic Information


Item Value
gene id G210188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98296410 ~ 98296659 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU238124
gctcagaacgcacccttgtggggccccagtgttgaggatcagcggggtggagatgttgttacctaccctcaccacctgggggcggtccgtcaggaagtccagtacccagttgcacagggcggggtcaagacccagggtctcgagcttgatgacgagcttggagggcactatggtgttaaatgctgagctgtaatcgatgaacagcattctcacataggtattccacctgtccagatgggacagggcactg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU238124 True 250 lncRNA 0.35 1 98296410 98296659

Neighbor


gene id symbol gene type direction distance location
LOC118936884 NA coding downstream 151399 98127948 ~ 98145517 (-)
LOC118943870 NA coding downstream 535610 97759882 ~ 97761086 (-)
LOC118944211 NA coding downstream 538747 97757564 ~ 97757663 (-)
LOC118944208 NA coding downstream 540683 97755630 ~ 97755727 (-)
LOC118943868 NA coding downstream 573227 97699305 ~ 97723186 (-)
LOC110500713 LOC106561713 coding upstream 16364 98313023 ~ 98352485 (-)
lmo2 rbtn2 coding upstream 127356 98424015 ~ 98426658 (-)
LOC110500720 LOC106561717 coding upstream 178075 98474734 ~ 98513861 (-)
edc3 LOC106561715 coding upstream 225339 98521998 ~ 98535690 (-)
LOC110500748 LOC106561725 coding upstream 291257 98587916 ~ 98601250 (-)
G210176 NA non-coding downstream 16870 98279191 ~ 98279540 (-)
G210175 NA non-coding downstream 21422 98274774 ~ 98274988 (-)
G210174 NA non-coding downstream 22564 98271116 ~ 98273846 (-)
G210132 NA non-coding downstream 25500 98269252 ~ 98270910 (-)
G210173 NA non-coding downstream 33683 98261255 ~ 98262727 (-)
G210195 LOC106600457 non-coding upstream 4434 98301093 ~ 98301413 (-)
G210243 NA non-coding upstream 69779 98366438 ~ 98366675 (-)
G210521 NA non-coding upstream 82500 98379159 ~ 98379385 (-)
G210523 NA non-coding upstream 85572 98382231 ~ 98382494 (-)
G210528 NA non-coding upstream 106476 98403135 ~ 98403367 (-)
G209841 NA other downstream 677198 97618859 ~ 97619212 (-)
G209802 NA other downstream 794016 97501172 ~ 97502394 (-)
G209560 NA other downstream 879222 97416821 ~ 97417188 (-)
G208658 NA other downstream 1874186 96421866 ~ 96422224 (-)
LOC118943885 LOC106561728 other upstream 621789 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 645815 98936783 ~ 98944041 (-)
G210765 NA other upstream 729073 99025732 ~ 99026118 (-)
G211127 NA other upstream 826574 99123233 ~ 99123658 (-)
LOC118936886 NA other upstream 1319017 99615676 ~ 99619142 (-)

Expression



Co-expression Network