G210683


Basic Information

Item Value
gene id G210683
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98711146 ~ 98712557 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU238774
cctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtagaccagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtagaccagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaagctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaagctagttgagaacaagttctcatttacaactgtgacctggccaagataaagcatagcagtgtgagcagacaacacagagttacacatggagtaaacaattaacaagtcaataacacagtagaaaaaaaagagagtctatatacattgtgtgcaaaaggcatgaggaggtaggcgaataattacaattttgcagattaacactggagtgataaatgatcagatggtcatgtacaggtagagatactggtgtgcaaaagagcagaaaagtaaatgcatataaacagtatggggatgaggtaggtaaaattgggtgggctatttaccgatagactatgtacagctgcagcgattggttagctgctcagatagcagatgtttgaagttggtgagggagataaaagtctccaactccagcgatttttgcaattcgttccagtcacaggcagcagagaactggaacgaaaggctgccaaatgaggtgttggctttagggatgaccagt
>TU238775
cctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtagaccagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtagaccagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaagctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaagctagttgagaacaagttctcatttacaactgtgacctggccaagataaagcatagcagtgtgagcagacaacacagagttacacatggagtaaacaattaacaagtcaataacacagtagaaaaaaaagagagtctatatacattgtgtgcaaaaggcatgaggaggtaggcgaataattacaattttgcagattaacactggagtgataaatgatcagatggtcatgtacaggtagagatactggtgtgcaaaagagcagaaaagtaaatgcatataaacagtatggggatgaggtaggtaaaattgggtgggctatttaccgatagactatgtacagctgcagcgattggttagctgctcagatagcagatgtttgaagttggtgagggagataaaagtctccaactccagcgatttttgcaattcgttccagtcacaggcagcagagaactggaacgaaaggctgccaaatgaggtgttggctttagggatgaccagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238774 False 950 lncRNA 0.45 3 98711146 98712557
TU238775 True 884 lncRNA 0.48 3 98711146 98712557

Neighbor

gene id symbol gene type direction distance location
LOC110502529 LOC106584711 coding downstream 22010 98642990 ~ 98689136 (-)
LOC110500748 LOC106561725 coding downstream 109896 98587916 ~ 98601250 (-)
edc3 LOC106561715 coding downstream 175456 98521998 ~ 98535690 (-)
LOC110500720 LOC106561717 coding downstream 197285 98474734 ~ 98513861 (-)
lmo2 rbtn2 coding downstream 284488 98424015 ~ 98426658 (-)
LOC110500636 NA coding upstream 83292 98795849 ~ 98808194 (-)
LOC110500630 NA coding upstream 90448 98803005 ~ 98808340 (-)
LOC110502520 LOC105018371 coding upstream 107224 98819781 ~ 98832865 (-)
LOC110500681 scamp5 coding upstream 129880 98842437 ~ 98854773 (-)
LOC118943884 LOC106561728 coding upstream 163517 98876074 ~ 98892143 (-)
G210638 NA non-coding downstream 32450 98673386 ~ 98678696 (-)
G210632 NA non-coding downstream 56656 98653561 ~ 98654490 (-)
G210623 NA non-coding downstream 69431 98639694 ~ 98641715 (-)
G210628 NA non-coding downstream 72600 98638209 ~ 98638546 (-)
G210695 NA non-coding upstream 29921 98742478 ~ 98749276 (-)
G210694 NA non-coding upstream 32510 98745067 ~ 98754802 (-)
G210693 NA non-coding upstream 52847 98765404 ~ 98767695 (-)
G210665 NA non-coding upstream 71771 98784328 ~ 98785563 (-)
G210706 NA non-coding upstream 73054 98785611 ~ 98786460 (-)
LOC118936884 NA other downstream 565629 98127948 ~ 98145517 (-)
G209841 NA other downstream 1091934 97618859 ~ 97619212 (-)
G209802 NA other downstream 1208752 97501172 ~ 97502394 (-)
G209560 NA other downstream 1293958 97416821 ~ 97417188 (-)
G208658 NA other downstream 2288922 96421866 ~ 96422224 (-)
LOC118943885 LOC106561728 other upstream 205891 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 229917 98936783 ~ 98944041 (-)
G210765 NA other upstream 313175 99025732 ~ 99026118 (-)
G211127 NA other upstream 410676 99123233 ~ 99123658 (-)
LOC118936886 NA other upstream 903119 99615676 ~ 99619142 (-)

Expression


Co-expression Network