G212858


Basic Information

Item Value
gene id G212858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101731089 ~ 101734796 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241723
atgtagtctagtctggaggtcaggaggttatgtagtttagtctggaggtcaggaggttatgtagtctagtctggaggtcaggaggttatgttgtCTAGTCTGGaagtcaggaggttatgtagtctagtctggaggtcaggaggttatgtagtctagtctgtggtagtctggaggtcaggaggttatgtagtctagtctggaggtcaggaggttatgtagtctagtctggaggtcaggaggttatatagtctagtctggaggtcaggaggttatgtagtctagtctggatgtcaggaggttatgtagtctggCCTGGAGgccaggaggttatgtagtctaatCTGAAGgtcaggaggttatgtagtctagtctcgAGGtcgggaggttatgtagtctagtctggaggtccggaggttatgtagtctaatctggaggtcaggaggttatgtagtctagtctggaggtcaggaggttatgtagtctagtctgtggTAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241723 True 497 lncRNA 0.35 2 101731089 101734796

Neighbor

gene id symbol gene type direction distance location
LOC118944015 NA coding downstream 24442 101706005 ~ 101706647 (-)
LOC118944014 NA coding downstream 27129 101701386 ~ 101703960 (-)
LOC110512506 LOC106590753 coding downstream 135703 101560267 ~ 101595386 (-)
LOC110501253 LOC106584787 coding downstream 177339 101482142 ~ 101553750 (-)
LOC110517830 LOC105018063 coding upstream 10472 101743015 ~ 101746551 (-)
LOC110501407 LOC106561868 coding upstream 178188 101912984 ~ 101916443 (-)
LOC110501416 LOC106561859 coding upstream 263003 101997799 ~ 102000087 (-)
commd4 comd4 coding upstream 553099 102287895 ~ 102292356 (-)
LOC110501505 LOC106561846 coding upstream 691261 102426057 ~ 102444259 (-)
G212849 NA non-coding downstream 3318 101727565 ~ 101727771 (-)
G212848 NA non-coding downstream 4062 101726785 ~ 101727027 (-)
G212841 NA non-coding downstream 9000 101721807 ~ 101722089 (-)
G212840 NA non-coding downstream 9448 101721381 ~ 101721641 (-)
G212838 NA non-coding downstream 10059 101720122 ~ 101721030 (-)
G212871 NA non-coding upstream 100714 101835510 ~ 101835791 (-)
G212873 NA non-coding upstream 102632 101837428 ~ 101837741 (-)
G212892 NA non-coding upstream 119059 101853855 ~ 101854076 (-)
G212895 NA non-coding upstream 120837 101855633 ~ 101855890 (-)
G212836 NA other downstream 11357 101719367 ~ 101719732 (-)
G212829 LOC106613263 other downstream 18242 101712238 ~ 101712847 (-)
LOC110502631 LOC106592148 other downstream 551328 100976119 ~ 101191014 (-)
pkp3a pkp3 other downstream 1016836 100662972 ~ 100716213 (-)
LOC110502607 ano5 other downstream 1251299 100461545 ~ 100543552 (-)
G213475 NA other upstream 651333 102386129 ~ 102531578 (-)
G214030 NA other upstream 1084572 102819368 ~ 102819829 (-)
G214038 NA other upstream 1109225 102844021 ~ 102847527 (-)
G214041 NA other upstream 1128611 102863407 ~ 102863771 (-)

Expression


Co-expression Network