Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110520252 |
| gene name | LOC106586360 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 56003832 ~ 56004785 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| gamma-crystallin M3-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021597427.1 | True | 667 | mRNA | 0.52 | 3 | 56003832 | 56004785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505323 | LOC106586359 | coding | downstream | 4271 | 55997766 ~ 55999561 (-) |
| LOC110520250 | LOC106586358 | coding | downstream | 15784 | 55987103 ~ 55988048 (-) |
| LOC110520251 | LOC106586357 | coding | downstream | 18355 | 55983873 ~ 55985477 (-) |
| LOC110520241 | LOC106586374 | coding | downstream | 79949 | 55890382 ~ 55923883 (-) |
| LOC110520238 | LOC106586370 | coding | downstream | 182590 | 55779503 ~ 55821242 (-) |
| LOC118936311 | LOC106586361 | coding | upstream | 12475 | 56017260 ~ 56018372 (-) |
| LOC110520253 | LOC106586384 | coding | upstream | 35975 | 56040760 ~ 56041698 (-) |
| LOC110520254 | LOC106586385 | coding | upstream | 43026 | 56047811 ~ 56049145 (-) |
| LOC110520260 | NA | coding | upstream | 490366 | 56495151 ~ 56578650 (-) |
| arl5a | arl5a | coding | upstream | 584772 | 56589557 ~ 56600573 (-) |
| G276518 | NA | non-coding | downstream | 26159 | 55977460 ~ 55977673 (-) |
| G276497 | NA | non-coding | downstream | 59673 | 55943419 ~ 55944159 (-) |
| G276420 | NA | non-coding | downstream | 66810 | 55936617 ~ 55937022 (-) |
| G276434 | NA | non-coding | downstream | 69702 | 55933836 ~ 55934130 (-) |
| G276661 | NA | non-coding | upstream | 175973 | 56180758 ~ 56181147 (-) |
| G276664 | NA | non-coding | upstream | 181367 | 56186152 ~ 56186362 (-) |
| G276675 | LOC106586387 | non-coding | upstream | 195388 | 56200173 ~ 56200414 (-) |
| G276689 | NA | non-coding | upstream | 212453 | 56217238 ~ 56217453 (-) |
| G276722 | NA | non-coding | upstream | 267566 | 56272351 ~ 56361440 (-) |
| G275250 | NA | other | downstream | 592345 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 884620 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 1321027 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 2752748 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 3295016 | 52693956 ~ 52708816 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 1265997 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 1398199 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 1579601 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 6709790 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 8964764 | 64969549 ~ 64970755 (-) |
