slc49a4 (dirc2)


Basic Information

Item Value
gene id slc49a4
gene name dirc2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57143435 ~ 57206958 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597462.2
AATGCCTACTGTACATCCCAGGTTTCGCTTTCAAAATTGTGACCATTTCCGTGAACGTCCAGGCATGCGCAGTGAAGTAGCAATGACATCGATTGTTGTTGTTTCTCTGGGCAACTGATATTGAAGTTAGATACCGGTACATTTGTTGCCATTGTGTAATCGAATATTGGACATAGCGCGCGGACTAAATCGCTGCTGAACGAACGCTACATTGTATCAAATGCGATGGGTGCTGCATCGAGCACAGAGGGTGAAAGGGAACCTCTTCTTGTTCCTCCTGACCGCGAGACGAGCATTCAGCCAGTTTACAGCCAAGTCTACGGGAGAAGATGGCTGGTTCTGACTCTGTTTTCCTTGTTGGCGTTCATGCAAGGGATAGTATGGAACACCTGGGGCCCAATTCAGAACTCTGCCATGCATGCGTACGATTTCACCAAATCTGACATCGCCGTGCTTGTTCTTTGGGGGCCAGTGGGGTTCGCGCCTTGGCTGCTATTTATATGGCTAATGGACAAAAAGGGTCTGCGGGTGTCTCTTCTACTGTCAGCCTTCTTCATGGTGATTGGGACAGCGCTGCGAAGTGTCCCTGTACAAGAACAGCATCTAAGACGATGGTTAATACACGCCGGTCAGCTGCTGAATGGCTTGGCTGGTCCAACCATAATGAGTGCCggccccctcctctccaccacatGGTTCGCTCCGGACCAACGAGCCACAGCCACCGCTGTCGCCTCATTGGTGAGCTACCTGGGGGCGGCGTGCTCCTTCATTGTCGGCCCACTGCTTGTGCCCGCCCCCAACGACACCACACGTGCCATGGTGAACCGAGCCGACGTCTCGACAGACACCCAGATGAACCACATACGAGACAGAATCCAACTGGTTTTGTATGCAGAGTTTGGTGTGGTGGCGATGCTGTTTGCTGCGGTACTGCTCTATTTCCCCTCCCGACCCCCCATTCCTCCCAGTGTGGCTGCTGCCAGCCAGAGACTCAGCTACAGGAGCAGCATCTGCAGACTACTCAGtAACCTCCGGTTCCTGATGATAGCATTGGCCTACGCGGTGCCTACAGGGGTGGTGGCAGGCTGGTCAGGAGTTCTGGACATGATCCTCACCCCTGCCAGAGTCAGCCAGgTGGATGCTGGCTGGATCGGGTTCTGGTCCATTGTGGGCGGCTGTGTGTTTGGAGTGGCCATGGCCAGgtTTGCAGATTCTATCCGGGGCATGCTGAAGCTCATCCTGGTCCTGATGATGGCTGGTGCTTCCCTGGCCTCCACCTGGTTCACATTAACCTGCCTGACCAGGCTCACACACCTACCCTCCACTGCAGCTACTCTTTACACCTCCTGTATCCTGGTGGGCATCTTCATCAACAGTAGTGTGCCCATCTTCTTTGAGCTCTTCATCGAGACCGTGTACCCCGTGCCAGAGGGCATCACCTGTGGCGTGGTCACCTTCCTCGGTAACCTGGTCACCGGctgcctcctcttcttcctcacctTCTACAGCACAGAGTTGTCGTGGCTAAACTGGTGTTTGACGGGCTCCTGTGCCTTCAGCCTCgtcctcatcctcttcttcagGGAATCCTACGACCGCCTCTACCTAGACGTCTTTGTCtcagtctgacacacacaaaaAGACTGGAACACGAGGAGAAAAAAGACAGGAACATTTGAAACGCACTGcacaaagaagaagaggaagaaaaatGGATTTCAGAAGTGCAACTTGCGCTCTTTTACGTTTTAAGTATAGCTGTAGGTGTAAACTTGTAATATGACGGTGGTCGGTGATTCATTGTGATTTCCTTGTAGCCAATGAGAAGCGCCAGCCAAGGGCCTCAGACAATTAGTAATTCATGTTAAGTCTTTATAAGTGTCGGTTTGGCCAGTTGGTCCTCTGATGCAGCATTGTCTTGTCTTTTTTATAATGTAAACTACAGTGGGACCTGGTCATGGTATGATGAGGGACTGTTGTTTGTTTAAAGATGCACTCTGTGGCAGGTGGTTTCCCTGTGGCCTGTTGGTCCTCTGATCTTAATGAGAGAAGAGAGGCCTGATTGGCTGAGTAGCTCTAGCAGCCAATCAGCAAGCCCCACCAATCTGTGCTAACAAGGGACCGTATAGCATTTTAGTGTCACTCATAACTGCTGGTTATGAATTGCAGGGGGCTAAAACTGTCAAACTAAGCTGTTCTGTTGAATTACCTGTGATATTACATGTCTTTTAATAGTGACATATGGTCTCCTTTTTTtactatatccccctctctcaagACTTATGCAAGACATTTTTTCTCCCTATGGGATTGAATTGATTGCAGGCCGTGCAGGTTCCTGCCAGTGTCGTCGACTATGATTGGACACCACCCTGGTGCACGCCAGTGTCTTGGGATATGATTGGATGAGCCGCAGAGACCGCCTCGCTCTGCATGCAAAGTCACTGCTTTaaaactctcctctctgtgtgtgtcgagGCTCTGCTGCGCGGGTCTCATGATGTTACCACACAGTCCGTTTTAATGAGCAGTTCAGAATATGGACGTTGGACGTAGTAGTTTCCCCGTGTCATTCTGACCTTTCAGCTGACAACGGGAGTCAGATATTTTGGTTTGGAGTTGGTTAATATGCAGACGAACATTTCAAAATggtcaaatgttttttgttgttgctgtttacAGTTTGTTATACTATATAGGAGATTTTTGAATTTTGAACTAAACTTGTTTCAGTGAGAAaggcatgttttttttaaatggttttaaCATGAAATATTTCTCAGTAGAAATGTCCATTATTATTACAGAGGGATCAGAACACTAACACAGTAGATACAGAGACAAATACAAAGACTGTCATGAAATATGTGAATACCGCTGTTGCACAGCTGAGACTGTGGCTGATTCTGTGGAAACCACAAACTATTAAGTCACCACGAAGCTGCTCTACATCTAACGCACAGCGTTCACCAGCAGTAGTCACTGTGCTGAGGACACTGACAACAAGAGGCAGGTAGTGGTTCGGTAAGCACCTCCTTGTCTGGACGGTCAGGATTGGACTTGGAGGGGATGCTTACTTTCCCACGGAGAAATAACACATGTTGAACTGATGTTCAACATGAAAAAGAGGGGAACGGGAAAGAACCACCTTTGTCCAGATTGTGGAGTGACTGGTCCTGAAAGGCACTAATCTACAAGGGACTTTAACTGGGAACTTATTTTTTCAACATGCCAAAACCACTCACCAACTCCCATTACTCGGCTGTGCCACAGACAAACCACAGAAAATGTTTTTCCTGGGTGATACGGTAtatagtatgtacagttgaagtcggaggtttacaccttagccaaatacatttaaactcatttttccacaattcctaacatttaatcctagtaagaattccctgtcttaggtcagttaggatcatcactt

Function

symbol description
dirc2 MFS transporter, FLVCR family, disrupted in renal carcinoma protein 2

NR:

description
disrupted in renal carcinoma protein 2-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15381 DIRC2, SLC49A3; MFS transporter, FLVCR family, disrupted in renal carcinoma protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597462.2 True 3442 mRNA 0.48 9 57143435 57206958

Neighbor

gene id symbol gene type direction distance location
LOC110520270 LOC106586417 coding downstream 226022 56867209 ~ 56917413 (-)
LOC110520269 LOC106586397 coding downstream 298782 56832398 ~ 56844653 (-)
LOC110520265 LOC106586394 coding downstream 475844 56652369 ~ 56667591 (-)
LOC110520263 LOC106586393 coding downstream 492482 56600804 ~ 56650953 (-)
arl5a arl5a coding downstream 542862 56589557 ~ 56600573 (-)
LOC110520276 LOC106586419 coding upstream 25675 57232633 ~ 57260239 (-)
si:dkey-91i10.3 LOC106586420 coding upstream 65515 57270782 ~ 57297762 (-)
LOC110520278 LOC106586422 coding upstream 114280 57321238 ~ 57330396 (-)
LOC118963713 NA coding upstream 125660 57332568 ~ 57336298 (-)
LOC110505369 LOC106586424 coding upstream 203023 57409981 ~ 57414314 (-)
G277168 NA non-coding downstream 89153 57053985 ~ 57054282 (-)
G277110 NA non-coding downstream 96580 56968036 ~ 57046855 (-)
G276969 NA non-coding downstream 323543 56818645 ~ 56819892 (-)
G276907 NA non-coding downstream 470843 56671494 ~ 56672592 (-)
G277259 NA non-coding upstream 1975 57208933 ~ 57209198 (-)
G277576 NA non-coding upstream 13629 57220587 ~ 57222617 (-)
G277604 NA non-coding upstream 59978 57266936 ~ 57267196 (-)
G277647 NA non-coding upstream 142614 57349572 ~ 57349815 (-)
G275250 NA other downstream 1731948 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2024223 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 2460630 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 3892351 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 4434619 52693956 ~ 52708816 (-)
G277673 LOC106586423 other upstream 196026 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 377428 57584386 ~ 57589183 (-)
G284018 NA other upstream 5507617 62714575 ~ 62715177 (-)
G286522 NA other upstream 7762591 64969549 ~ 64970755 (-)

Expression


Co-expression Network