si:dkey-3d4.3 (LOC106586432)


Basic Information

Item Value
gene id si:dkey-3d4.3
gene name LOC106586432
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57934070 ~ 57943312 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597478.2
CCCACACTTCCTGCTCAAACCACAATATGCCCCTCCTTCTGAATGAAATGCTCTTCAAAGCCCGGATGATCACTGCAGCGCATCAAAACCCAATGAAGAGGAACGGTCATTTTCCTGAGGAGAATAGCAGCCCAATGACAGCTGAGATTGAGGATGCCCTAGGATGAGCCGGAGGAGCAGTAGCAGCCCCAGCCTGTGGACCGTACTGCCTCAGAGTGGCCCTGCACCATGTGAACGCTACAAGCATGCCTGCTGCTCCTACGGGGACAGTGTCTTtgtgttgggagggagggagagccacTCGCTCAGGGACTTCTGGAGGTATAATGTTGtACGCAATGAGTGGACAGAGTTGGACTGTAGCTGTGAGGCAGCACCTGAGGAGCTTCAGGAACATTCCATGGTGGCCCATCAGGGTGTTCTGTATGTCTTCGGTGGAATGATTGATTCTGCGTACACTATATGGAAAACCCCCCTCTGGGTGTTTGATATTGTGAAAGAGCAGTGGGTGTCCTGGCAGGATAGGAACCCCCCTCAGAATCAAGTGCCAGTCAACAGGAAGGGCCACAGTGCCGTGGTGTTTAGCTCTGCCATGTACATCTACGGAGGATACATTGACATGAGAGCCTCATCACAGGAGTTTTGGAAGTTAGAATTTGACACTATGTTGTGGTCTCTGCTGGACTGTACCCAGACAGAGGTGGGTCCTGGTCCCAGACACAGCCACTCTGCCATGACACACCTGGACTGCATGTACCTTTTCGGGGGTCTGAGAGGCCTGAGGGAGCAGAGGGATCTGTGGAGATGGAACTCTACCAGTCATTCCTGGAGCTGTCTCAACGCCACATCAGGACCCTCTAAGCTGGTGGGCCACTCAACTGTGGTCTACCGGGACAGCATGCTTCtgtttggaggaggagagagCCAGCACACACCCAGGAGCTGTCTATGGAGGTACAGCTTCACCACCCAGACCTGGGGGAAGCTAGCCGTGCTACCCGGCTCCAACCCACCTCCCCACAGGATCTACCACTGCTGTGCTGGCCTGGGCCCTAGCTACCAGCCTTCCGTGACCACAACCACCAGCACCACCCTGATCCCCAGCACCACCATCAGAAACAGACTTGACAGCAAGATACGGCCGTTCAAGAACAAATGCTTCCCATCCTCCTCAAAGACAGAGGGCACTATAGAGCTGGAGACGTTTAGTAGCTCGGAGAAGCTATTGACTGAAGTGGAGGACTATTGTAATGGTCTAAGTGGGAATGACACTCAGCTGTTGGGGAATTGTCTGACCTTTGAGAACCAGGAGGCCTTCAGTAAGCAGTGGAGCTGTGAGAATATAGAGGAGAATGGTTCAGGTAAACCAGAGGAGAGCCATGAGAGCATAGCACAAAACCTGCCTGATTTGCTACTGGTGCTGGGGGGAAAGCCCTTAGTTAGACACACGGTCATCTCTGTGTGGCAGATGACATTGGCTGACTTCTGAGCTTTGAGAGAAGGGATGGCATTTtataaactacagtgccttggagagtattcatcccccttagcgtatttcctattttgttgtgttacaacctagaatttaaatagattttttgtcgggatttcatgtaatggacatacacaaaatagtccaaattggtgaagtgaa
>XM_021597477.2
CTTCCTGCTCAAACCACAATATGCCCCTCCTTCTGAATGAAATGCTCTTCAAAGCCCGGATGATCACTGCAGCGCATCAAAACCCAATGAAGAGGAACGGGTGAGATATCCGCTCTCTAATCGTCATTTTCCTGAGGAGAATAGCAGCCCAATGACAGCTGAGATTGAGGATGCCCTAGGATGAGCCGGAGGAGCAGTAGCAGCCCCAGCCTGTGGACCGTACTGCCTCAGAGTGGCCCTGCACCATGTGAACGCTACAAGCATGCCTGCTGCTCCTACGGGGACAGTGTCTTtgtgttgggagggagggagagccacTCGCTCAGGGACTTCTGGAGGTATAATGTTGtACGCAATGAGTGGACAGAGTTGGACTGTAGCTGTGAGGCAGCACCTGAGGAGCTTCAGGAACATTCCATGGTGGCCCATCAGGGTGTTCTGTATGTCTTCGGTGGAATGATTGATTCTGCGTACACTATATGGAAAACCCCCCTCTGGGTGTTTGATATTGTGAAAGAGCAGTGGGTGTCCTGGCAGGATAGGAACCCCCCTCAGAATCAAGTGCCAGTCAACAGGAAGGGCCACAGTGCCGTGGTGTTTAGCTCTGCCATGTACATCTACGGAGGATACATTGACATGAGAGCCTCATCACAGGAGTTTTGGAAGTTAGAATTTGACACTATGTTGTGGTCTCTGCTGGACTGTACCCAGACAGAGGTGGGTCCTGGTCCCAGACACAGCCACTCTGCCATGACACACCTGGACTGCATGTACCTTTTCGGGGGTCTGAGAGGCCTGAGGGAGCAGAGGGATCTGTGGAGATGGAACTCTACCAGTCATTCCTGGAGCTGTCTCAACGCCACATCAGGACCCTCTAAGCTGGTGGGCCACTCAACTGTGGTCTACCGGGACAGCATGCTTCtgtttggaggaggagagagCCAGCACACACCCAGGAGCTGTCTATGGAGGTACAGCTTCACCACCCAGACCTGGGGGAAGCTAGCCGTGCTACCCGGCTCCAACCCACCTCCCCACAGGATCTACCACTGCTGTGCTGGCCTGGGCCCTAGCTACCAGCCTTCCGTGACCACAACCACCAGCACCACCCTGATCCCCAGCACCACCATCAGAAACAGACTTGACAGCAAGATACGGCCGTTCAAGAACAAATGCTTCCCATCCTCCTCAAAGACAGAGGGCACTATAGAGCTGGAGACGTTTAGTAGCTCGGAGAAGCTATTGACTGAAGTGGAGGACTATTGTAATGGTCTAAGTGGGAATGACACTCAGCTGTTGGGGAATTGTCTGACCTTTGAGAACCAGGAGGCCTTCAGTAAGCAGTGGAGCTGTGAGAATATAGAGGAGAATGGTTCAGGTAAACCAGAGGAGAGCCATGAGAGCATAGCACAAAACCTGCCTGATTTGCTACTGGTGCTGGGGGGAAAGCCCTTAGTTAGACACACGGTCATCTCTGTGTGGCAGATGACATTGGCTGACTTCTGAGCTTTGAGAGAAGGGATGGCATTTtataaactacagtgccttggagagtattcatcccccttagcgtatttcctattttgttgtgttacaacctagaatttaaatagattttttgtcgggatttcatgtaatggacatacacaaaatagtccaaattggtgaagtga

Function

NR:

description
kelch domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597478.2 False 1657 mRNA 0.52 9 57934070 57943312
XM_021597477.2 True 1673 mRNA 0.52 9 57934071 57943306

Neighbor

gene id symbol gene type direction distance location
LOC110520286 LOC106586431 coding downstream 14764 57909607 ~ 57919306 (-)
LOC110520285 LOC106586430 coding downstream 199153 57632140 ~ 57734917 (-)
LOC110520284 LOC106586429 coding downstream 325044 57595333 ~ 57609026 (-)
LOC118964377 NA coding downstream 452350 57481596 ~ 57481720 (-)
LOC110520281 LOC106586425 coding downstream 506726 57416082 ~ 57427344 (-)
LOC118964362 NA coding upstream 559245 58502557 ~ 58502699 (-)
LOC110520288 LOC106586437 coding upstream 800589 58743901 ~ 58761841 (-)
LOC110520289 LOC106586438 coding upstream 823115 58766427 ~ 58774628 (-)
LOC110520290 myo1b coding upstream 832319 58775631 ~ 58932254 (-)
vwc2l LOC106586444 coding upstream 1172104 59115416 ~ 59144836 (-)
G277974 NA non-coding downstream 143925 57789815 ~ 57790145 (-)
G277968 NA non-coding downstream 148409 57785432 ~ 57785661 (-)
G277966 NA non-coding downstream 149246 57784548 ~ 57784824 (-)
G278797 NA non-coding upstream 383160 58326472 ~ 58327641 (-)
G278917 NA non-coding upstream 534893 58478205 ~ 58478560 (-)
G278941 NA non-coding upstream 552180 58495492 ~ 58495703 (-)
G278946 NA non-coding upstream 553947 58497259 ~ 58497557 (-)
G279071 NA non-coding upstream 629667 58572979 ~ 58573239 (-)
G277749 LOC106586429 other downstream 344887 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 530495 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 636308 57270782 ~ 57297762 (-)
G275250 NA other downstream 2522583 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2814858 55068639 ~ 55122013 (-)
G284018 NA other upstream 4771263 62714575 ~ 62715177 (-)
G286522 NA other upstream 7026237 64969549 ~ 64970755 (-)
G286580 marco other upstream 7070947 65014259 ~ 65029736 (-)
G286638 NA other upstream 7111388 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 7291868 65235180 ~ 65235908 (-)

Expression


Co-expression Network