Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964362 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 58502557 ~ 58502699 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118964362 | True | 143 | mRNA | 0.33 | 1 | 58502557 | 58502699 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-3d4.3 | LOC106586432 | coding | downstream | 559245 | 57934070 ~ 57943312 (-) |
| LOC110520286 | LOC106586431 | coding | downstream | 583251 | 57909607 ~ 57919306 (-) |
| LOC110520285 | LOC106586430 | coding | downstream | 767640 | 57632140 ~ 57734917 (-) |
| LOC110520284 | LOC106586429 | coding | downstream | 893531 | 57595333 ~ 57609026 (-) |
| LOC118964377 | NA | coding | downstream | 1020837 | 57481596 ~ 57481720 (-) |
| LOC110520288 | LOC106586437 | coding | upstream | 241202 | 58743901 ~ 58761841 (-) |
| LOC110520289 | LOC106586438 | coding | upstream | 263728 | 58766427 ~ 58774628 (-) |
| LOC110520290 | myo1b | coding | upstream | 272932 | 58775631 ~ 58932254 (-) |
| vwc2l | LOC106586444 | coding | upstream | 612717 | 59115416 ~ 59144836 (-) |
| cps1 | cps1 | coding | upstream | 1663279 | 60165978 ~ 60253769 (-) |
| G278946 | NA | non-coding | downstream | 5000 | 58497259 ~ 58497557 (-) |
| G278941 | NA | non-coding | downstream | 6854 | 58495492 ~ 58495703 (-) |
| G278917 | NA | non-coding | downstream | 23997 | 58478205 ~ 58478560 (-) |
| G278797 | NA | non-coding | downstream | 174916 | 58326472 ~ 58327641 (-) |
| G278220 | NA | non-coding | downstream | 513928 | 57935265 ~ 57988629 (-) |
| G279071 | NA | non-coding | upstream | 70280 | 58572979 ~ 58573239 (-) |
| G279231 | NA | non-coding | upstream | 174048 | 58676747 ~ 58677044 (-) |
| G279243 | NA | non-coding | upstream | 185284 | 58687983 ~ 58688198 (-) |
| G279269 | NA | non-coding | upstream | 197787 | 58700486 ~ 58701324 (-) |
| G279318 | NA | non-coding | upstream | 207825 | 58710524 ~ 58710779 (-) |
| G277749 | LOC106586429 | other | downstream | 913374 | 57584386 ~ 57589183 (-) |
| G277673 | LOC106586423 | other | downstream | 1098982 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 1204795 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 3091070 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 3383345 | 55068639 ~ 55122013 (-) |
| G284018 | NA | other | upstream | 4211876 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 6466850 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 6511560 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 6552001 | 65054700 ~ 65075985 (-) |
| G286953 | LOC107579696 | other | upstream | 6732481 | 65235180 ~ 65235908 (-) |
