epsti1 (epsti1)


Basic Information

Item Value
gene id epsti1
gene name epsti1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63267118 ~ 63282972 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974896.1
ttattatctatgcatagtcactttacccctacctacatgtacatattacctcaatttacTTCGACTAACCTTTACCCCAGCAACTTGTCTCGGACAGttcagatGGGTTCACCATGATACCACCCATTGAATCACGAAGGAGTAAACTACAAATGATGGctcagaaagaagaggaggatttACAGAGATGGAAGGAAGCAAACAGACCTGGTCCTGTCCAGCTGGCCCCAGAGAGgctagGTGGTGCTGTGTCATTGGCTGAGGCCAGAGAGAGGCAGCTGTTCGAGTTACGCCGATCTAAACTGCAGAAACAGcTGAGAAAAGAGGAGATGGACCGGCAACGGAAACAGGCTGAGGAAGAGGAGAATGACAGGATGAAGGCTAAACAGCGGGATAAGGctgagagactggaggagaggagagaacaggaggagaggcagaggagagaagtTCTCCAACAGGACCACCTCAGGAAGACAAAGCAGTTCCTTCAGAGGGTGGAGAGGTCAGATGCAGCTCCATTGGCAGTGACTAGTGCCTCACACACATCACCCTGGGCCAGAGCCCAGGaatacaggtcagagaggagagaggaggagaacaccgCTCTACAGCTGAAGAAGGAGGAACAGAGGATGAAGAGTGAGGttttggaggagaaagagagtaatcaagaggaggagaggatgagagaattGAGAAGGGGGAGATCAGCTTTCCTCGACCGACTGCAGGGTGGGGGCACAGAGGTTGCAGGGGGGCAGAATGAGCTACAGCGCCCCCCTGTGGCTTTGGGGGAGGACAGGAGTGGCTGGCAGACCCATAGCCAGACCTCCCGACCACAAGACACCTTTACATCCCCGGAGCCTGACCCAACACACAGCACCTCAGAGTGGCGAGAGGAGACCAATCCAGACTTTGAGTGGGTTGTGATGAAGCTTCAGAATAGCTTCCCGTTCTGTGAGAGACCCTTTCTGGAGGACATCGTCATTCAGTGTAACGGAGACTATCAACAGGCCTATGACTTACTTATCTAGTGTTGCGGAGACTACCAACAGGCATGTGTGTAAGTCTAATGATAACCCTTGTGTATTAACTTTTAGTGCTGAATCTTCCTCATATCTTCATCTAGTACTAGTGAACCTTGAAAGTAATAGTAGAATTGTGAAACTTGATTCCGTAATAATGATAATATTGTGAAACTTGACAATATCTATTGGATCAAGTAATGATACTATTGTGAAAGGTAATATCTTAGTAATAATAATAGAGTGAAACTACTTCATTTCTTCAGCACAAATTACAAATTGCTCCATTGTGTCTGACATTGATTTAGGATGTTTTTTTACAAATGAGTTGTAGGTCACTAGGATGAGTCAGCATCTTTATATCCATTTGGCTTTTAACAAGCTCATTGTGTTGTTATGGAAACATCTGTCctgttttctgtttctctgtataAAGGCTAATCACAATAACATGTTGGCTATCCATTACAAGGGTTTGTCATCTGTATGATGGACAACAATAGACCGTCTCCCTTGGTGTGTCCTATTAGATAATATGTTGGGTCTTCATGTTCTGTGTCACCTCTGGTTTCGCTGAGATGTTTGACTTTTCACTTTGTATTCTTCAGATGTTTCCCTGATTGAATTAGTATTGTAATGTTTGGGTCAGCTATCCAGGGCTGTGTTTAATAAATCGCTGTTCAACACGATACG
>XM_036974893.1
GCCACAGGGGGGTAGGGGCTTCTCCAATTTACCGGCGTCTCAGACAGTTCTGTGTCAGTAGCCATAGGATATAGGCTGCCACCATGGACGACCAGGGATATTATAGTAATAATAGAATCAATTTGACCAATTCAGGAGTTAATCGGAGAACAAATAAGCAGTCTGGAAATAATGCATGGCAAGAGCCCGGGGATTCCAATCCTGATGTCAATGTTAACGCACCTGTTAACGCGAACACCGACCCACAAACACAGCAGGATCCAACTCAGCCTCGATAttcagatGGGTTCACCATGATACCACCCATTGAATCACGAAGGAGTAAACTACAAATGATGGctcagaaagaagaggaggatttACAGAGATGGAAGGAAGCAAACAGACCTGGTCCTGTCCAGCTGGCCCCAGAGAGgctagGTGGTGCTGTGTCATTGGCTGAGGCCAGAGAGAGGCAGCTGTTCGAGTTACGCCGATCTAAACTGCAGAAACAGcTGAGAAAAGAGGAGATGGACCGGCAACGGAAACAGGCTGAGGAAGAGGAGAATGACAGGATGAAGGCTAAACAGCGGGATAAGGctgagagactggaggagaggagagaacaggaggagaggcagaggagagaagtTCTCCAACAGGACCACCTCAGGAAGACAAAGCAGTTCCTTCAGAGGGTGGAGAGGTCAGATGCAGCTCCATTGGCAGTGACTAGTGCCTCACACACATCACCCTGGGCCAGAGCCCAGGaatacaggtcagagaggagagaggaggagaacaccgCTCTACAGCTGAAGAAGGAGGAACAGAGGATGAAGAGTGAGGttttggaggagaaagagagtaatcaagaggaggagaggatgagagaattGAGAAGGGGGAGATCAGCTTTCCTCGACCGACTGCAGGGTGGGGGCACAGAGGTTGCAGGGGGGCAGAATGAGCTACAGCGCCCCCCTGTGGCTTTGGGGGAGGACAGGAGTGGCTGGCAGACCCATAGCCAGACCTCCCGACCACAAGACACCTTTACATCCCCGGAGCCTGACCCAACACACAGCACCTCAGAGTGGCGAGAGGAGACCAATCCAGACTTTGAGTGGGTTGTGATGAAGCTTCAGAATAGCTTCCCGTTCTGTGAGAGACCCTTTCTGGAGGACATCGTCATTCAGTGTAACGGAGACTATCAACAGGCCTATGACTTACTTATCTAGTGTTGCGGAGACTACCAACAGGCATGTGTGTAAGTCTAATGATAACCCTTGTGTATTAACTTTTAGTGCTGAATCTTCCTCATATCTTCATCTAGTACTAGTGAACCTTGAAAGTAATAGTAGAATTGTGAAACTTGATTCCGTAATAATGATAATATTGTGAAACTTGACAATATCTATTGGATCAAGTAATGATACTATTGTGAAAGGTAATATCTTAGTAATAATAATAGAGTGAAACTACTTCATTTCTTCAGCACAAATTACAAATTGCTCCATTGTGTCTGACATTGATTTAGGATGTTTTTTTACAAATGAGTTGTAGGTCACTAGGATGAGTCAGCATCTTTATATCCATTTGGCTTTTAACAAGCTCATTGTGTTGTTATGGAAACATCTGTCctgttttctgtttctctgtataAAGGCTAATCACAATAACATGTTGGCTATCCATTACAAGGGTTTGTCATCTGTATGATGGACAACAATAGACCGTCTCCCTTGGTGTGTCCTATTAGATAATATGTTGGGTCTTCATGTTCTGTGTCACCTCTGGTTTCGCTGAGATGTTTGACTTTTCACTTTGTATTCTTCAGATGTTTCCCTGATTGAATTAGTATTGTAATGTTTGGGTCAGCTATCCAGGGCTGTGTTTAATAAATCGCTGTTCAACACGATACG
>XM_036974897.1
TGTCTGCCACAGGGGGGTAGGGGCTTCTCCAATTTACCGGCGTCTCAGACAGTTCTGTGTCAGTAGCCATAGGATATAGGCTGCCACCATGGACGACCAGGGATATTATAGTAATAATAGAATCAATTTGACCAATTCAGGAGTTAATCGGAGAACAAATAAGCAGTCTGGAAATAATGCATGGCAAGAGCCCGGGGATTCCAATCCTGATGTCAATGTTAACGCACCTGTTAACGCGAACACCGACCCACAAACACAGCAGGATCCAACTCAGCCTCGATAttcagatGGGTTCACCATGATACCACCCATTGAATCACGAAGGAGTAAACTACAAATGATGGctcagaaagaagaggaggatttACAGAGATGGAAGGAAGCAAACAGACCTGGTCCTGTCCAGCTGGCCCCAGAGAGgctagGTGGTGCTGTGTCATTGGCTGAGGCCAGAGAGAGGCAGCTGTTCGAGTTACGCCGATCTAAACTGCAGAAACAGcTGAGAAAAGAGGAGATGGACCGGCAACGGAAACAGGCTGAGGAAGAGGAGAATGACAGGATGAAGGCTAAACAGCGGGATAAGGctgagagactggaggagaggagagaacaggaggagaggcagaggagagaagtTCTCCAACAGGACCACCTCAGGAAGACAAAGCAGTTCCTTCAGAGGGTGGAGAGGTCAGATGCAGCTCCATTGGCAGTGACTAGTGCCTCACACACATCACCCTGGGCCAGAGCCCAGGaatacaggtcagagaggagagaggaggagaacaccgCTCTACAGCTGAAGAAGGAGGAACAGAGGATGAAGATCCAGACTTTGAGTGGGTTGTGATGAAGCTTCAGAATAGCTTCCCGTTCTGTGAGAGACCCTTTCTGGAGGACATCGTCATTCAGTGTAACGGAGACTATCAACAGGCCTATGACTTACTTATCTAGTGTTGCGGAGACTACCAACAGGCATGTGTGTAAGTCTAATGATAACCCTTGTGTATTAACTTTTAGTGCTGAATCTTCCTCATATCTTCATCTAGTACTAGTGAACCTTGAAAGTAATAGTAGAATTGTGAAACTTGATTCCGTAATAATGATAATATTGTGAAACTTGACAATATCTATTGGATCAAGTAATGATACTATTGTGAAAGGTAATATCTTAGTAATAATAATAGAGTGAAACTACTTCATTTCTTCAGCACAAATTACAAATTGCTCCATTGTGTCTGACATTGATTTAGGATGTTTTTTTACAAATGAGTTGTAGGTCACTAGGATGAGTCAGCATCTTTATATCCATTTGGCTTTTAACAAGCTCATTGTGTTGTTATGGAAACATCTGTCctgttttctgtttctctgtataAAGGCTAATCACAATAACATGTTGGCTATCCATTACAAGGGTTTGTCATCTGTATGATGGACAACAATAGACCGTCTCCCTTGGTGTGTCCTATTAGATAATATGTTGGGTCTTCATGTTCTGTGTCACCTCTGGTTTCGCTGAGATGTTTGACTTTTCACTTTGTATTCTTCAGATGTTTCCCTGATTGAATTAGTATTGTAATGTTTGGGTCAGCTATCCAGGGCTGTGTTTAATAAATCGCTGTTCAACACGATACG
>XM_036974895.1
CGCGTGTCTGCCACAGGGGGGTAGGGGCTTCTCCAATTTACCGGCGTCTCAGACAGTTCTGTGTCAGTAGCCATAGGATATAGGCTGCCACCATGGACGACCAGGGATATTATAGTAATAATAGAATCAATTTGACCAATTCAGGAGTTAATCGGAGAACAAATAAGCAGTCTGGAAATAATGCATGGCAAGAGCCCGGGGATTCCAATCCTGATGTCAATGTTAACGCACCTGTTAACGCGAACACCGACCCACAAACACAGCAGGATCCAACTCAGCCTCGATAttcagatGGGTTCACCATGATACCACCCATTGAATCACGAAGGAGTAAACTACAAATGATGGctcagaaagaagaggaggatttACAGAGATGGAAGGAAGCAAACAGACCTGGTCCTGTCCAGCTGGCCCCAGAGAGgctagGTGGTGCTGTGTCATTGGCTGAGGCCAGAGAGAGGCAGCTGTTCGAGTTACGCCGATCTAAACTGCAGAAACAGcTGAGAAAAGAGGAGATGGACCGGCAACGGAAACAGGCTGAGGAAGAGGAGAATGACAGGATGAAGGCTAAACAGCGGGATAAGGctgagagactggaggagaggagagaacaggaggagaggcagaggagagaagtTCTCCAACAGGACCACCTCAGGAAGACAAAGCAGTTCCTTCAGAGGGTGGAGAGGTCAGATGCAGCTCCATTGGCAGTGACTAGTGCCTCACACACATCACCCTGGGCCAGAGCCCAGGaatacaggtcagagaggagagaggaggagaacaccgCTCTACAGCTGAAGAAGGAGGAACAGAGGATGAAGAGTGAGGttttggaggagaaagagagtaatcaagaggaggagaggatgagagaattGAGAAGGGGGAGATCAGCTTTCCTCGACCGACTGCAGGGTGGGGGCACAGAGGTTGCAGGGGGGCAGAATGAGCTACAGCGCCCCCCTGTGGCTTTGGGGGAGGACAGGAGTGGCTGGCAGACCCATAGCCAGACCTCCCGACCACAAGACACCTTTACATCCCCGGAGCCTGACCCAACACACAGCACCTCAGAGTGGCGAGAGGAGACCAGTAAGACACACACGGAtATCCAGACTTTGAGTGGGTTGTGATGAAGCTTCAGAATAGCTTCCCGTTCTGTGAGAGACCCTTTCTGGAGGACATCGTCATTCAGTGTAACGGAGACTATCAACAGGCCTATGACTTACTTATCTAGTGTTGCGGAGACTACCAACAGGCATGTGTGTAAGTCTAATGATAACCCTTGTGTATTAACTTTTAGTGCTGAATCTTCCTCATATCTTCATCTAGTACTAGTGAACCTTGAAAGTAATAGTAGAATTGTGAAACTTGATTCCGTAATAATGATAATATTGTGAAACTTGACAATATCTATTGGATCAAGTAATGATACTATTGTGAAAGGTAATATCTTAGTAATAATAATAGAGTGAAACTACTTCATTTCTTCAGCACAAATTACAAATTGCTCCATTGTGTCTGACATTGATTTAGGATGTTTTTTTACAAATGAGTTGTAGGTCACTAGGATGAGTCAGCATCTTTATATCCATTTGGCTTTTAACAAGCTCATTGTGTTGTTATGGAAACATCTGTCctgttttctgtttctctgtataAAGGCTAATCACAATAACATGTTGGCTATCCATTACAAGGGTTTGTCATCTGTATGATGGACAACAATAGACCGTCTCCCTTGGTGTGTCCTATTAGATAATATGTTGGGTCTTCATGTTCTGTGTCACCTCTGGTTTCGCTGAGATGTTTGACTTTTCACTTTGTATTCTTCAGATGTTTCCCTGATTGAATTAGTATTGTAATGTTTGGGTCAGCTATCCAGGGCTGTGTTTAATAAATCGCTGTTCAACACGATACG
>XM_036974894.1
ACGCGTGTCTGCCACAGGGGGGTAGGGGCTTCTCCAATTTACCGGCGTCTCAGACAGTTCTGTGTCAGTAGCCATAGGATATAGGCTGCCACCATGGACGACCAGGGATATTATAGTAATAATAGAATCAATTTGACCAATTCAGGAGTTAATCGGAGAACAAATAAGCAGTCTGGAAATAATGCATGGCAAGAGCCCGGGGATTCCAATCCTGATGTCAATGTTAACGCACCTGTTAACGCGAACACCGACCCACAAACACAGCAGGATCCAACTCAGCCTCGATAttcagatGGGTTCACCATGATACCACCCATTGAATCACGAAGGAGTAAACTACAAATGATGGctcagaaagaagaggaggatttACAGAGATGGAAGGAAGCAAACAGACCTGGTCCTGTCCAGCTGGCCCCAGAGAGgctagGTGGTGCTGTGTCATTGGCTGAGGCCAGAGAGAGGCAGCTGTTCGAGTTACGCCGATCTAAACTGCAGAAACAGcTGAGAAAAGAGGAGATGGACCGGCAACGGAAACAGGCTGAGGAAGAGGAGAATGACAGGATGAAGGCTAAACAGCGGGATAAGGctgagagactggaggagaggagagaacaggaggagaggcagaggagagaagtTCTCCAACAGGACCACCTCAGGAAGACAAAGCAGTTCCTTCAGAGGGTGGAGAGGTCAGATGCAGCTCCATTGGCAGTGACTAGTGCCTCACACACATCACCCTGGGCCAGAGCCCAGGaatacaggtcagagaggagagaggaggagaacaccgCTCTACAGCTGAAGAAGGAGGAACAGAGGATGAAGAGTGAGGttttggaggagaaagagagtaatcaagaggaggagaggatgagagaattGAGAAGGGGGAGATCAGCTTTCCTCGACCGACTGCAGGGTGGGGGCACAGAGGTTGCAGGGGGGCAGAATGAGCTACAGCGCCCCCCTGTGGCTTTGGGGGAGGACAGGAGTGGCTGGCAGACCCATAGCCAGACCTCCCGACCACAAGACACCTTTACATCCCCGGAGCCTGACCCAACACACAGCACCTCAGAGTGGCGAGAGGAGACCAATGACCCAGCAGAGAGCGTCATGGGAGTGTCCTCTCAGACTGCAGTGAACGGGCTTGGTCTGGGATGAGACTGTCATCCTTATGTcttgtctgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtatgtgtgtgggaTTGGATGAGGCTTTGGTGTTTAGAATACAAAGCAGAGCTCTGTCATCGTTTCTCATTACAAGGAACATTCATCCAAAATCAAAACGTTTCATAACTCATAAAGTGGTCTAAAGTCAAGTCTAAATTCGACGGCATCTGTTGCACAGATCCAGCTGTATACAGAAGAAATATACAGTTTTCATTTAGGGTTTGATAGGTCAGGATATGGTACCTCTGTCTCCATACCCCAGCATTtagatacagatgtaggatcttaatttgatcactcttttgttgctgaaaaTGTTCCAActggaaatgcagatgagcttcgtgaatcacataaattcactgaaaacccacattaacacatggttatattaacagtattgcacttttcatgtagcctacttttggccgGCTAATAGCCAAACCAccaatcaagcaacattatggacaaagcgttcaaatcctgttgctgcaggattattttgctgtgacaatatacATTtgaaattaagatcctgcatctgtattCAGAACTAAAGGATCATACACTGTGTGTGGTATAAAACTCCATGAGAGCAGTTGTCTTGCTTTCCCAGGCTTGTCAAGAGACCGCAACAAAGGATAACTTTGTTACCTAATATGACTGGAAAAATCATACATGTgcataaatgtaaaatgtaacactgaactctgtttttctctc

Function

symbol description
epsti1 Orthologous to human EPSTI1 (epithelial stromal interaction 1).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974896.1 False 1721 mRNA 0.45 11 63267118 63280956
XM_036974893.1 False 1901 mRNA 0.46 11 63267118 63282962
XM_036974897.1 False 1638 mRNA 0.44 9 63267118 63282967
XM_036974895.1 False 1927 mRNA 0.46 11 63267118 63282971
XM_036974894.1 True 1998 mRNA 0.47 11 63267936 63282972

Neighbor

gene id symbol gene type direction distance location
LOC118944692 NA coding downstream 100070 63164294 ~ 63167048 (-)
chmp2ba chmp2b coding downstream 151758 63100074 ~ 63115360 (-)
LOC110520361 LOC106586409 coding downstream 210385 63028878 ~ 63056733 (-)
LOC110520360 LOC106586512 coding downstream 241837 63011134 ~ 63025281 (-)
LOC110504409 sh3rf3 coding downstream 323600 62869748 ~ 62943518 (-)
LOC110520368 LOC106582175 coding upstream 36876 63319848 ~ 63436412 (-)
LOC110520372 tsc22d1 coding upstream 244871 63527843 ~ 63601105 (-)
LOC110520374 kctd4 coding upstream 366203 63649175 ~ 63650920 (-)
LOC118964309 kctd4 coding upstream 376724 63659696 ~ 63661441 (-)
LOC110504432 tpt1 coding upstream 399498 63682470 ~ 63688255 (-)
G284669 NA non-coding downstream 104323 63162562 ~ 63162795 (-)
G284666 NA non-coding downstream 108408 63158416 ~ 63158710 (-)
G284481 NA non-coding downstream 125799 63141112 ~ 63141319 (-)
G284474 NA non-coding downstream 134562 63132313 ~ 63132556 (-)
G284472 NA non-coding downstream 135625 63131272 ~ 63131493 (-)
G284689 NA non-coding upstream 34294 63317266 ~ 63318062 (-)
G284775 NA non-coding upstream 102278 63385250 ~ 63385463 (-)
G284778 NA non-coding upstream 106548 63389520 ~ 63389759 (-)
G284779 NA non-coding upstream 108072 63391044 ~ 63391399 (-)
G284780 NA non-coding upstream 109124 63392096 ~ 63392327 (-)
G284018 NA other downstream 551941 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 5677935 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 5863543 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 5969356 57270782 ~ 57297762 (-)
G275250 NA other downstream 7855631 55410143 ~ 55411487 (-)
G286522 NA other upstream 1686577 64969549 ~ 64970755 (-)
G286580 marco other upstream 1731287 65014259 ~ 65029736 (-)
G286638 NA other upstream 1771728 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 1952208 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 2015235 65298207 ~ 65300417 (-)

Expression


Co-expression Network