LOC110520506 (LOC106586710)


Basic Information

Item Value
gene id LOC110520506
gene name LOC106586710
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70550269 ~ 70555181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975061.1
GTGGTGCAATATAAGACTCTCCCATGCCCCTTTTTCTTGTTGTTTGTGACCAAAATGTGCAATCCGCACTCTGACCTGCGACAAGCAGCAAAACACAACACAGCGTCTATTCTTCCGGAAAGTCACACGAAGAAGATATACGTGACACGCGAGTCATCTGATCTACGTTAGAGCAAAAGGGGAATTGTGTTGCTGGAAAATCGCCGAAGGATGGAGACTTTATTCAGCGTAGCGTTTATCTTCTGCTCGGCTTTTACGGCAGGCGTTCAGGGGGACAGCCTCACCATATTGCAGGCCCCAGAGTACGTGTCCTTCCAAAAGGGAGACTGGCCAATCTCTGGGGAGAAGATTCCAGATATGGTGGCTCTGACTATGGGGTTCTCTGTCcaggagGATCTCTCCTGGCCTGGCCTCCGGGCAGGTCAGTTGTTCCAGCGTCCCAGGGCCAACGTGCTGGTGGTGGTGAGGGGGGTGGACAGCCTGGCCCTGCCCCAGAATGTGGCCTCCTATCCCTTGGAGAACccggTACCCTTCAACCTGGACAGTGTGGCTGAGACGGTTCATTCTCTCTTTGCTGAGGACACTCCTGTGGTCCTCCAGCTGGCCCCTAGTGAGGAGAGGCTGTACATGCTGGGGAAGGCCAACGCGGTGTTTGAGGACCTGCCTGTGACCCTGCAGCAGATCCGTTCTCGTCTCTCCCAGGATGGCTCCGTGCTGGCCTCCCTGCCACTTAACTCCCTCAACCGCAACGCTGAGGCTGATCTGCTCTTCCTGTCTGAGGTCCAGGTTCTGCATGACATCACTGCCCTGCTGCAGAGACACCGGCACCTGGCCCAGGACCACTCCCCTGACCTGTACTCCCTGGAGCTGTCTGGCCTGGAGGAGCTGGGCCGTCGCTACGGACAGGACTCCCCACAGTATCGAGATGCCACCGCCATCCTGGCCAACGTCCTACAGAAGAGTAACCCTGGTAGTCCCTATAACCTGGCCTATAAATATAACTTTAATTATGCAGTGATCTTCAACATCGTGCTATGGCTGATGATCATCCTTGCCTTGGCTGTCATTGTCATCTCATACAATCTGTGGAACATGGACCCAGGATATGACAGCATCATCTACAGGATGACCAATCAGAAGATCAGGTTGGACTAAAGTCTGCCCAGCAACACTCCAGCCCTCCAATTAGCCCTCTCCTATCCTAGTGGAAGTTTATTGTTTTTCTTGTTTTGTGTGAAAAATAAAGATGTGGGGCCTTGGAGTCTTACCCCCTACTCTCTACGTACTTGTTTAGATCTGAGAGAGTTGGATAGGTATAAGCAATATGGTGAAAATAATTCCACCCAGCTTGGTATATAAGCCATGGTCGAACTAATTATAAACCAAATAGCGTATACCTATCCTAACTCTCAGGTATACACAAGGTTATAGGGGTTGATTGTGGACTGAGGAGTAGACACCAGAATAGCAGTTGTTCAGGTGGAGGTAATAGTTTAATCCAATATGTATGAGATGTATGTGAGGTGCAGTTCACTGTAATGTCACTGGTAAGTACTGCAAAGGTTGACTATACAGAATtgtaacactgtagagctgtGTCTGAAGCCTAGTCATGTACCTTCTAGCCCACACTTCACATTTATTTTGAGTGTCCACAGTAGTTGTCCTACTTCCTTGGTGATTGAAAATGTCCAgttttattttttgtaaaaataaaataaaaattattgtAATGCCCTGAAAGACTGAGAATtatatggtgtgtgtgatgtAAATGATTGTATTTTTTGAGATATAAAACTTAAGTTAAagtgaaatgtgtatatattgaagttAGAAATGCAAATATCTTGAATAAACTGCTGTATTGGTATGGGGAGGTCTGTAATATTCACTGGCATGTTGCATGAATTTTGCAGTTGTGGACAATATGAAACAAAATATTATGTACAGTATGGGCAATAAATGATTTAATATCATAA
>XM_021597879.2
GTTGTTTGTGACCAAAATGTGCAATCCGCACTCTGACCTGCGACAAGCAGCAAAACACAACACAGCGTCTATTCTTCCGGAAAGTCACACGAAGAAGATATACGTGACACGCGAGTCATCTGATCTACGTTAGAGCAAAAGGGGAATTGTGTTGCTGGAAAATCGCCGAAGGATGGAGACTTTATTCAGCGTAGCGTTTATCTTCTGCTCGGCTTTTACGGCAGGCGTTCAGGGGGACAGCCTCACCATATTGCAGGCCCCAGAGTACGTGTCCTTCCAAAAGGGAGACTGGCCAATCTCTGGGGAGAAGATTCCAGATATGGTGGCTCTGACTATGGGGTTCTCTGTCcaggagGATCTCTCCTGGCCTGGCCTCCGGGCAGGTCAGTTGTTCCAGCGTCCCAGGGCCAACGTGCTGGTGGTGGTGAGGGGGGTGGACAGCCTGGCCCTGCCCCAGAATGTGGCCTCCTATCCCTTGGAGAACccggTACCCTTCAACCTGGACAGTGTGGCTGAGACGGTTCATTCTCTCTTTGCTGAGGACACTCCTGTGGTCCTCCAGCTGGCCCCTAGTGAGGAGAGGCTGTACATGCTGGGGAAGGCCAACGCGGTGTTTGAGGACCTGCCTGTGACCCTGCAGCAGATCCGTTCTCGTCTCTCCCAGGATGGCTCCGTGCTGGCCTCCCTGCCACTTAACTCCCTCAACCGCAACGCTGAGGCTGATCTGCTCTTCCTGTCTGAGGTCCAGGTTCTGCATGACATCACTGCCCTGCTGCAGAGACACCGGCACCTGGCCCAGGACCACTCCCCTGACCTGTACTCCCTGGAGCTGTCTGGCCTGGAGGAGCTGGGCCGTCGCTACGGACAGGACTCCCCACAGTATCGAGATGCCACCGCCATCCTGGCCAACGTCCTACAGAAGTTTGGTGAGGATGTGTTTGGTCTCTATGGTGACAGTGCGGTGGTCGAGGTTGTCACGGTGAAGAGCTTTGAGGCACCATTGACCAGGAAGTCCCGCTCCATCCTGGAGTCCAAAcagattAGTAACCCTGGTAGTCCCTATAACCTGGCCTATAAATATAACTTTAATTATGCAGTGATCTTCAACATCGTGCTATGGCTGATGATCATCCTTGCCTTGGCTGTCATTGTCATCTCATACAATCTGTGGAACATGGACCCAGGATATGACAGCATCATCTACAGGATGACCAATCAGAAGATCAGGTTGGACTAAAGTCTGCCCAGCAACACTCCAGCCCTCCAATTAGCCCTCTCCTATCCTAGTGGAAGTTTATTGTTTTTCTTGTTTTGTGTGAAAAATAAAGATGTGGGGCCTTGGAGTCTTACCCCCTACTCTCTACGTACTTGTTTAGATCTGAGAGAGTTGGATAGGTATAAGCAATATGGTGAAAATAATTCCACCCAGCTTGGTATATAAGCCATGGTCGAACTAATTATAAACCAAATAGCGTATACCTATCCTAACTCTCAGGTATACACAAGGTTATAGGGGTTGATTGTGGACTGAGGAGTAGACACCAGAATAGCAGTTGTTCAGGTGGAGGTAATAGTTTAATCCAATATGTATGAGATGTATGTGAGGTGCAGTTCACTGTAATGTCACTGGTAAGTACTGCAAAGGTTGACTATACAGAATtgtaacactgtagagctgtGTCTGAAGCCTAGTCATGTACCTTCTAGCCCACACTTCACATTTATTTTGAGTGTCCACAGTAGTTGTCCTACTTCCTTGGTGATTGAAAATGTCCAgttttattttttgtaaaaataaaataaaaattattgtAATGCCCTGAAAGACTGAGAATtatatggtgtgtgtgatgtAAATGATTGTATTTTTTGAGATATAAAACTTAAGTTAAagtgaaatgtgtatatattgaagttAGAAATGCAAATATCTTGAATAAACTGCTGTATTGGTATGGGGAGGTCTGTAATATTCACTGGCATGTTGCATGAATTTTGCAGTTGTGGACAATATGAAACAAAATATTATGTACAGTATGGGCAATAAATGATTTAATATCATAA

Function

NR:

description
PREDICTED: renin receptor-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K19514 ATP6AP2, PRR; renin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975061.1 False 1982 mRNA 0.47 8 70550269 70555181
XM_021597879.2 True 2064 mRNA 0.47 9 70550307 70555181

Neighbor

gene id symbol gene type direction distance location
LOC110520505 LOC106586712 coding upstream 10512 70463764 ~ 70539757 (+)
LOC110518747 LOC106586693 coding upstream 236269 70231555 ~ 70314000 (+)
LOC110520498 LOC100194560 coding upstream 256703 70291840 ~ 70293566 (+)
LOC110520495 LOC106586691 coding upstream 457462 70072804 ~ 70092807 (+)
LOC110520493 LOC106586690 coding upstream 479799 70057383 ~ 70070470 (+)
LOC118964320 NA coding downstream 303 70555484 ~ 70564655 (+)
LOC110520507 senp7 coding downstream 21706 70576887 ~ 70597458 (+)
LOC110504631 LOC106582154 coding downstream 56970 70612151 ~ 70655881 (+)
LOC110520508 abi3bp coding downstream 155950 70711131 ~ 70769507 (+)
LOC110520514 dcbld2 coding downstream 354176 70909357 ~ 70944650 (+)
G292201 NA non-coding upstream 5895 70544162 ~ 70544374 (+)
G292200 NA non-coding upstream 6244 70543799 ~ 70544025 (+)
G292184 NA non-coding upstream 63024 70486920 ~ 70487245 (+)
G292170 NA non-coding upstream 86788 70463267 ~ 70463481 (+)
G292169 NA non-coding upstream 89724 70460327 ~ 70460545 (+)
G292414 NA non-coding downstream 13863 70569044 ~ 70569255 (+)
G292415 NA non-coding downstream 14334 70569515 ~ 70569750 (+)
G292427 NA non-coding downstream 31138 70586319 ~ 70586893 (+)
G291461 NA other upstream 598101 69949667 ~ 69952168 (+)
LOC110504602 LOC106586683 other upstream 628150 69915810 ~ 69923807 (+)
LOC110520485 dynlt3 other upstream 680057 69861894 ~ 69870212 (+)
G291327 NA other upstream 854433 69695395 ~ 69695836 (+)
G293204 NA other downstream 811002 71366183 ~ 71366423 (+)
il1rapl1a LOC106586724 other downstream 901260 71280049 ~ 71706686 (+)
G293450 NA other downstream 1182624 71737805 ~ 71738175 (+)
LOC110520522 LOC106586718 other downstream 1412567 71947367 ~ 71975611 (+)

Expression


Co-expression Network